RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
ARHGEF40-207ENST00000556399 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
ARHGEF40-207ENST00000556399 IGLV2-11P01706 119 aa11.62□□□□□ -0.55
ARHGEF40-207ENST00000556399 C1QTNF4Q9BXJ3 329 aa11.62□□□□□ -0.55
ARHGEF40-207ENST00000556399 ZNF48Q96MX3 618 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF40-207ENST00000556399 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 SPANXA1Q9NS26 97 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 B4DSR2 109 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 CENPVL3A0A0U1RRI6 287 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 CRYGBP07316 175 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 RASL10AQ92737 203 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 IGLC6P0CF74 106 aa11.61□□□□□ -0.55
ARHGEF40-207ENST00000556399 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 SPAG8Q99932 426 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 MSRB2Q9Y3D2 182 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 IGF2-ASQ6U949 168 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 DEFB131AP59861 70 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
ARHGEF40-207ENST00000556399 TRGV1A0A0A0MS02 117 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 RPL36AP83881 106 aaKnown RBP11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 RPL36ALQ969Q0 106 aaKnown RBP11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 CFC1P0CG37 223 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 LINC00158P58513 81 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 PRIMA1Q86XR5 153 aa11.59□□□□□ -0.55
ARHGEF40-207ENST00000556399 IGHV3-53P01767 116 aa11.58□□□□□ -0.56
ARHGEF40-207ENST00000556399 C16orf54Q6UWD8 224 aa11.58□□□□□ -0.56
ARHGEF40-207ENST00000556399 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF40-207ENST00000556399 GNLYP22749 145 aa11.58□□□□□ -0.56
ARHGEF40-207ENST00000556399 E9PLD3 99 aa11.57□□□□□ -0.56
ARHGEF40-207ENST00000556399 ZFP2Q6ZN57 461 aa11.57□□□□□ -0.56
ARHGEF40-207ENST00000556399 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
ARHGEF40-207ENST00000556399 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
ARHGEF40-207ENST00000556399 CRPP02741 224 aa11.57□□□□□ -0.56
ARHGEF40-207ENST00000556399 U3KQK5 164 aa11.57□□□□□ -0.56
ARHGEF40-207ENST00000556399 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
ARHGEF40-207ENST00000556399 TRGV4A0A0C4DH28 118 aa11.56□□□□□ -0.56
ARHGEF40-207ENST00000556399 MSMBP08118 114 aa11.56□□□□□ -0.56
ARHGEF40-207ENST00000556399 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
ARHGEF40-207ENST00000556399 C11orf44Q8N8P7 122 aa11.56□□□□□ -0.56
ARHGEF40-207ENST00000556399 INSP01308 110 aa11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 DEFB1P60022 68 aa11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 RPL39P62891 51 aaKnown RBP11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 FOXI1Q12951 378 aa11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 CHCHD5Q9BSY4 110 aa11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 IGHV3-16A0A0C4DH30 117 aa11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 RHOHQ15669 191 aa11.55□□□□□ -0.56
ARHGEF40-207ENST00000556399 IGHV3-38A0A0C4DH36 116 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 LEPROTO15243 131 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 UBE2E2Q96LR5 201 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 TEN1Q86WV5 123 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 ZFP36P26651 326 aaKnown RBP11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 A4D1N5 150 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 C11orf86A6NJI1 115 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 RHODO00212 210 aa11.54□□□□□ -0.56
ARHGEF40-207ENST00000556399 H3BUA1 57 aa11.53□□□□□ -0.56
ARHGEF40-207ENST00000556399 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
ARHGEF40-207ENST00000556399 IFITM1P13164 125 aa11.53□□□□□ -0.56
ARHGEF40-207ENST00000556399 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
ARHGEF40-207ENST00000556399 RNF185Q96GF1 192 aa11.53□□□□□ -0.56
ARHGEF40-207ENST00000556399 CARD19Q96LW7 228 aa11.52□□□□□ -0.56
ARHGEF40-207ENST00000556399 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
ARHGEF40-207ENST00000556399 PAX4O43316 350 aa11.52□□□□□ -0.57
ARHGEF40-207ENST00000556399 CMC4P56277 68 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 CFAP161Q6P656 301 aa11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 A0A0J9YXV3 536 aa11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 GAGE2AQ6NT46 116 aa11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 MUSTN1Q8IVN3 82 aa11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 MAPKAPK5-AS1Q8N8E1 139 aa11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 C11orf68Q9H3H3 251 aaKnown RBP11.51□□□□□ -0.57
ARHGEF40-207ENST00000556399 TCTEX1D4Q5JR98 221 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 PTH2Q96A98 100 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 ODF3BA8MYP8 253 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 ANKRD29Q8N6D5 301 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 CCDC140Q96MF4 163 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 LY6LH3BQJ8 138 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 SMAD5-AS1Q9Y6J3 95 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 BDP1A6H8Y1 2624 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 AJUBAQ96IF1 538 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
ARHGEF40-207ENST00000556399 TMEM86BQ8N661 226 aa11.49□□□□□ -0.57
ARHGEF40-207ENST00000556399 Q8NA96 180 aa11.49□□□□□ -0.57
ARHGEF40-207ENST00000556399 SPANXB1Q9NS25 103 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF40-207ENST00000556399 MED14OSP0DP75 135 aa11.49□□□□□ -0.57
ARHGEF40-207ENST00000556399 DSCAML1Q8TD84 2053 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms