RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 APELAP0DMC3 54 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 DEFA4P12838 97 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 ZNF25P17030 456 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-240ENST00000556339 RPL27AP46776 148 aaKnown RBP2.96□□□□□ -1.94
ATXN3-240ENST00000556339 HNRNPA3P51991 378 aaKnown RBP2.96□□□□□ -1.94
ATXN3-240ENST00000556339 MFAP2P55001 183 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 SYNJ2BPP57105 145 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 ATP5G2Q06055 141 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 RIGQ13278 110 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 PDE6HQ13956 83 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 PRSS8Q16651 343 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 SAPCD1Q5SSQ6 148 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 C16orf54Q6UWD8 224 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 PATE2Q6UY27 113 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 RBPMS2Q6ZRY4 209 aaKnown RBP2.96□□□□□ -1.94
ATXN3-240ENST00000556339 LINC00305Q7Z4B0 112 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 COX8CQ7Z4L0 72 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 SPATA12Q7Z6I5 190 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 GTSCR1Q86UQ5 136 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 NIT1Q86X76 327 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 Q8N976 141 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 TXN2Q99757 166 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 TMEM208Q9BTX3 173 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 TMEM70Q9BUB7 260 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 TMEM191AQ9H0A3 160 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 RNASE7Q9H1E1 156 aaKnown RBP2.96□□□□□ -1.94
ATXN3-240ENST00000556339 RPP21Q9H633 154 aaKnown RBP2.96□□□□□ -1.94
ATXN3-240ENST00000556339 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 STAB2Q8WWQ8 2551 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.95□□□□□ -1.94
ATXN3-240ENST00000556339 hDV102S1A0JD36 115 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 PGPA6NDG6 321 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 NPIPB5A8MRT5 1133 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 HIGD1CA8MV81 97 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 M0R2Z0 102 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 NDUFA3O95167 84 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 TCRAP04437 139 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 SLC25A5P05141 298 aaKnown RBP2.95□□□□□ -1.94
ATXN3-240ENST00000556339 CFC1BP0CG36 223 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 CFC1P0CG37 223 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 IGHV4-30-4P0DP06 118 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 TSPOP30536 169 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 WT1-ASQ06250 92 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 TNXAQ16473 311 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 C14orf177Q52M58 125 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 CASC10Q5T4H9 136 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 LCN12Q6JVE5 192 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 MRPL54Q6P161 138 aaKnown RBP2.95□□□□□ -1.94
ATXN3-240ENST00000556339 Q6ZN92 141 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 BPIFA4PQ86YQ2 179 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 TMEM75Q8N9X5 138 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 ZNF738Q8NE65 137 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 MYOZ3Q8TDC0 251 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 DYNLRB2Q8TF09 96 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 USMG5Q96IX5 58 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 FNDC4Q9H6D8 234 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-240ENST00000556339 PEMTQ9UBM1 199 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 PEF1Q9UBV8 284 aaKnown RBP2.95□□□□□ -1.94
ATXN3-240ENST00000556339 HIGD1AQ9Y241 93 aa2.95□□□□□ -1.94
ATXN3-240ENST00000556339 F11RQ9Y624 299 aaKnown RBP2.95□□□□□ -1.94
ATXN3-240ENST00000556339 LOC102724200A0A096LPH7 203 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-240ENST00000556339 TRAV5A0A0B4J249 113 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 A0A1B0GUT8 65 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 IGLC7A0M8Q6 106 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 C2orf70A6NJV1 201 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 H3BUA1 57 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 K7EP13 123 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 CHEK1O14757 476 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 SIVA1O15304 175 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 CSN1S1P47710 185 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 NDPQ00604 133 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 PSG9Q00887 426 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 SLAQ13239 276 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 UBE2V1Q13404 147 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 KLK9Q2XQG4 91 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 FAM106AQ4KMX7 169 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 ZNF493Q6ZR52 646 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 OR10W1Q8NGF6 305 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 OR9G4Q8NGQ1 327 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 OR10AG1Q8NH19 301 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 ATP6V0BQ99437 205 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 Q9H3A6 140 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 THYN1Q9P016 225 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 KLK9Q9UKQ9 250 aa2.94□□□□□ -1.94
ATXN3-240ENST00000556339 TRBV19A0A075B6N1 114 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 OR4C46A6NHA9 309 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 TEX22C9J3V5 150 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 F2Z2F3 143 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 I3L2K1 104 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 IGLV1-51P01701 117 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 PPBPP02775 128 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 CSN3P07498 182 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 IGLC1P0CG04 106 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 CT45A10P0DMU9 189 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms