RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	LINC00476	Q8WZB0	136 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	C20orf144	Q9BQM9	153 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	C1orf43	Q9BWL3	253 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	PHLDA3	Q9Y5J5	127 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	SETX	Q7Z333	2677 aa	Known RBP	4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	TRAV12-2	A0A075B6T6	113 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	IGHV1OR15-1	A0A075B7D0	117 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	CBY3	A6NI87	242 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067		M0R2Z0	102 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	CD7	P09564	240 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	SMIM17	P0DL12	118 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	FXYD7	P58549	80 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	SST	P61278	116 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	ODF3L2	Q3SX64	289 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	ANXA2R	Q3ZCQ2	193 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	GFI1B	Q5VTD9	330 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	PRIMA1	Q86XR5	153 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	ZFP82	Q8N141	532 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	TMEM256	Q8N2U0	113 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	WFDC9	Q8NEX5	89 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	LINC01587	Q99440	93 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	GOLT1B	Q9Y3E0	138 aa		4.1	□□□□□ -1.75
ATL1-208	ENST00000556067	C2CD3	Q4AC94	2353 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	IGKV3D-20	A0A0C4DH25	116 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067		H3BVH4	76 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	OR5AL1	P0C617	328 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	ARMS2	P0C7Q2	107 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	TRGC1	P0CF51	173 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	IGLC6	P0CF74	106 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	HTN1	P15515	57 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	IGLL1	P15814	213 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	CTRL	P40313	264 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	NDUFA6	P56556	154 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	PRR9	Q5T870	116 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	AMTN	Q6UX39	209 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	TMEM136	Q6ZRR5	245 aa		4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	TRPT1	Q86TN4	253 aa	Known RBP	4.09	□□□□□ -1.75
ATL1-208	ENST00000556067	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	MUC21	A0A0G2JKD1	596 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	MUC21	A0A140T8X8	626 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067		A0A1B0GXF2	115 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067		A8MTW9	85 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067		M0R381	172 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	GNRH2	O43555	120 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BK	O60814	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	ZNF324	O75467	553 aa	Predicted RBP	4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BJ	P06899	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	RPL35A	P18077	110 aa	Known RBP	4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	NTF3	P20783	257 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BO	P23527	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	S100A2	P29034	98 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BB	P33778	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	APOC4	P55056	127 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BD	P58876	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BC	P62807	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	ZNF415	Q09FC8	603 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST2H2BE	Q16778	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	TDRG1	Q3Y452	100 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	DNLZ	Q5SXM8	178 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	BAGE3	Q86Y29	109 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	DEFB125	Q8N687	156 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BH	Q93079	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BN	Q99877	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	HIST1H2BM	Q99879	126 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	XCL2	Q9UBD3	114 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	NF1	P21359	2839 aa		4.08	□□□□□ -1.76
ATL1-208	ENST00000556067	JMJD1C	Q15652	2540 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	IGHV3OR16-12	A0A075B7B8	117 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.07	□□□□□ -1.76
ATL1-208	ENST00000556067		F5H697	171 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	SNAI2	O43623	268 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	PPBP	P02775	128 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	SRI	P30626	198 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	CKS2	P33552	79 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	SNRPE	P62304	92 aa	Known RBP	4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	ZNF493	Q6ZR52	646 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	AP1S3	Q96PC3	154 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	LINC00467	Q9BRT7	94 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	SPX	Q9BT56	116 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	CNFN	Q9BYD5	112 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	TMEM191A	Q9H0A3	160 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	CSTL1	Q9H114	145 aa		4.07	□□□□□ -1.76
ATL1-208	ENST00000556067	IGHV4-4	A0A075B6R2	117 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	IGHV3-16	A0A0C4DH30	117 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	RBMY1B	A6NDE4	496 aa	Known RBP	4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	RBMY1E	A6NEQ0	496 aa	Known RBP	4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	CRX	O43186	299 aa	Predicted RBP	4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	PPP1R17	O96001	155 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	RBMY1D	P0C7P1	496 aa	Known RBP	4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	SLA	Q13239	276 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	KIAA1644	Q3SXP7	199 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	OR10J3	Q5JRS4	329 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	FAM104B	Q5XKR9	115 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067		Q6ZQT7	251 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	ORMDL3	Q8N138	153 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	GATD1	Q8NB37	220 aa		4.06	□□□□□ -1.76
ATL1-208	ENST00000556067	OR10AG1	Q8NH19	301 aa		4.06	□□□□□ -1.76

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