RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
XRCC3-215ENST00000555964 RAB2AP61019 212 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 URGCP-MRPS24S4R325 110 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 EIF3GO75821 320 aaKnown RBP eCLIP11.22□□□□□ -0.61
XRCC3-215ENST00000555964 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
XRCC3-215ENST00000555964 CDC34P49427 236 aaPredicted RBP11.22□□□□□ -0.61
XRCC3-215ENST00000555964 SGK494Q96LW2 274 aa11.22□□□□□ -0.61
XRCC3-215ENST00000555964 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
XRCC3-215ENST00000555964 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 UPK1BO75841 260 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 FLI1Q01543 452 aaPredicted RBP11.21□□□□□ -0.61
XRCC3-215ENST00000555964 WFDC2Q14508 124 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 SAPCD1Q5SSQ6 148 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 Q8N976 141 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 SYT8Q8NBV8 401 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 PARLQ9H300 379 aa11.21□□□□□ -0.61
XRCC3-215ENST00000555964 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 HMGB3O15347 200 aaKnown RBP11.2□□□□□ -0.62
XRCC3-215ENST00000555964 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
XRCC3-215ENST00000555964 ZNF80P51504 273 aaPredicted RBP11.2□□□□□ -0.62
XRCC3-215ENST00000555964 GAGE1Q13065 139 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 GAGE4Q13068 117 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 GAGE5Q13069 117 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
XRCC3-215ENST00000555964 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 CYB561D1Q8N8Q1 229 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 TMEM75Q8N9X5 138 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 TMEM167BQ9NRX6 74 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 C11orf21Q9P2W6 132 aa11.2□□□□□ -0.62
XRCC3-215ENST00000555964 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 RHODO00212 210 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 LECT2O14960 151 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 MBP02144 154 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 LINC00694P0DN24 101 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 PRNTQ86SH4 94 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 OR2G3Q8NGZ4 309 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 MARVELD1Q9BSK0 173 aa11.19□□□□□ -0.62
XRCC3-215ENST00000555964 GCHFRP30047 84 aa11.18□□□□□ -0.62
XRCC3-215ENST00000555964 ASIPP42127 132 aa11.18□□□□□ -0.62
XRCC3-215ENST00000555964 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
XRCC3-215ENST00000555964 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
XRCC3-215ENST00000555964 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
XRCC3-215ENST00000555964 WFDC1Q9HC57 220 aa11.18□□□□□ -0.62
XRCC3-215ENST00000555964 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
XRCC3-215ENST00000555964 EPDR1Q9UM22 224 aa11.18□□□□□ -0.62
XRCC3-215ENST00000555964 ELOBQ15370 118 aa11.17□□□□□ -0.62
XRCC3-215ENST00000555964 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
XRCC3-215ENST00000555964 Q8N3U1 123 aa11.17□□□□□ -0.62
XRCC3-215ENST00000555964 BAALCQ8WXS3 180 aa11.17□□□□□ -0.62
XRCC3-215ENST00000555964 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
XRCC3-215ENST00000555964 PSMG3Q9BT73 122 aaPredicted RBP11.17□□□□□ -0.62
XRCC3-215ENST00000555964 CHCHD7Q9BUK0 85 aa11.17□□□□□ -0.62
XRCC3-215ENST00000555964 CXorf1O96002 111 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 DEFA1P59665 94 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 DEFA3P59666 94 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
XRCC3-215ENST00000555964 OR2T35Q8NGX2 323 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
XRCC3-215ENST00000555964 IGKV2D-24A0A075B6R9 120 aa11.15□□□□□ -0.62
XRCC3-215ENST00000555964 SERF2P84101 59 aa11.15□□□□□ -0.62
XRCC3-215ENST00000555964 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
XRCC3-215ENST00000555964 A0A087WX48 190 aa11.14□□□□□ -0.63
XRCC3-215ENST00000555964 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
XRCC3-215ENST00000555964 OXTP01178 125 aa11.14□□□□□ -0.63
XRCC3-215ENST00000555964 HSD17B11Q8NBQ5 300 aa11.14□□□□□ -0.63
XRCC3-215ENST00000555964 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-215ENST00000555964 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
XRCC3-215ENST00000555964 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
XRCC3-215ENST00000555964 RNF222A6NCQ9 220 aa11.13□□□□□ -0.63
XRCC3-215ENST00000555964 Q0VG73 95 aa11.13□□□□□ -0.63
XRCC3-215ENST00000555964 NIT1Q86X76 327 aa11.13□□□□□ -0.63
XRCC3-215ENST00000555964 OR11H4Q8NGC9 324 aa11.13□□□□□ -0.63
XRCC3-215ENST00000555964 B4DEV8 164 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 H3BVH4 76 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 IFNA7P01567 189 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 UFSP1Q6NVU6 142 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
XRCC3-215ENST00000555964 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 SAMD10Q9BYL1 202 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 KLK12Q9UKR0 248 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 ARL2-SNX15V9GYD0 113 aa11.12□□□□□ -0.63
XRCC3-215ENST00000555964 IGLV2-8P01709 118 aa11.11□□□□□ -0.63
XRCC3-215ENST00000555964 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
XRCC3-215ENST00000555964 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
XRCC3-215ENST00000555964 FAM74A4Q5TZK3 123 aa11.11□□□□□ -0.63
XRCC3-215ENST00000555964 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
XRCC3-215ENST00000555964 NKX6-2Q9C056 277 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-215ENST00000555964 TNFSF18Q9UNG2 199 aa11.11□□□□□ -0.63
XRCC3-215ENST00000555964 TRBV10-1A0A0K0K1A3 114 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms