RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 C9orf85Q96MD7 179 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
FOXN3-211ENST00000555855 GCGP01275 180 aa12.78□□□□□ -0.36
FOXN3-211ENST00000555855 SEC11BP0C7V7 166 aa12.78□□□□□ -0.36
FOXN3-211ENST00000555855 CHAC1Q9BUX1 264 aa12.78□□□□□ -0.36
FOXN3-211ENST00000555855 SMIM3Q9BZL3 60 aa12.78□□□□□ -0.36
FOXN3-211ENST00000555855 C11orf21Q9P2W6 132 aa12.78□□□□□ -0.36
FOXN3-211ENST00000555855 URGCP-MRPS24S4R325 110 aa12.78□□□□□ -0.36
FOXN3-211ENST00000555855 ZNF80P51504 273 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-211ENST00000555855 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-211ENST00000555855 ZFP2Q6ZN57 461 aa12.77□□□□□ -0.37
FOXN3-211ENST00000555855 A8MWV9 139 aa12.76□□□□□ -0.37
FOXN3-211ENST00000555855 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-211ENST00000555855 ZFP69Q49AA0 526 aa12.76□□□□□ -0.37
FOXN3-211ENST00000555855 SMUG1Q53HV7 270 aa12.76□□□□□ -0.37
FOXN3-211ENST00000555855 PPP1R1CQ8WVI7 109 aa12.76□□□□□ -0.37
FOXN3-211ENST00000555855 PSG8Q9UQ74 426 aa12.76□□□□□ -0.37
FOXN3-211ENST00000555855 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 RNF222A6NCQ9 220 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 PET100P0DJ07 73 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 S100A4P26447 101 aaKnown RBP12.75□□□□□ -0.37
FOXN3-211ENST00000555855 RPL12P30050 165 aaKnown RBP12.75□□□□□ -0.37
FOXN3-211ENST00000555855 CYB561D1Q8N8Q1 229 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 OR2T35Q8NGX2 323 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 ENKURQ8TC29 256 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 PARLQ9H300 379 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 PLA2G2DQ9UNK4 145 aa12.75□□□□□ -0.37
FOXN3-211ENST00000555855 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
FOXN3-211ENST00000555855 TCRAP04437 139 aa12.74□□□□□ -0.37
FOXN3-211ENST00000555855 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
FOXN3-211ENST00000555855 TMEM75Q8N9X5 138 aa12.74□□□□□ -0.37
FOXN3-211ENST00000555855 C5orf17Q8NAS9 161 aa12.74□□□□□ -0.37
FOXN3-211ENST00000555855 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
FOXN3-211ENST00000555855 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
FOXN3-211ENST00000555855 MPC2O95563 127 aa12.73□□□□□ -0.37
FOXN3-211ENST00000555855 RAB2AP61019 212 aa12.73□□□□□ -0.37
FOXN3-211ENST00000555855 PIK3CD-AS1Q5SR53 167 aa12.73□□□□□ -0.37
FOXN3-211ENST00000555855 CIRBP-AS1Q8TBR5 109 aa12.73□□□□□ -0.37
FOXN3-211ENST00000555855 HMCN2Q8NDA2 5059 aa12.73□□□□□ -0.37
FOXN3-211ENST00000555855 FLI1Q01543 452 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-211ENST00000555855 ELOBQ15370 118 aa12.72□□□□□ -0.37
FOXN3-211ENST00000555855 SAPCD1Q5SSQ6 148 aa12.72□□□□□ -0.37
FOXN3-211ENST00000555855 PRNTQ86SH4 94 aa12.72□□□□□ -0.37
FOXN3-211ENST00000555855 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
FOXN3-211ENST00000555855 KLK12Q9UKR0 248 aa12.72□□□□□ -0.37
FOXN3-211ENST00000555855 LRP1Q07954 4544 aaKnown RBP12.72□□□□□ -0.37
FOXN3-211ENST00000555855 UBR4Q5T4S7 5183 aa12.71□□□□□ -0.37
FOXN3-211ENST00000555855 ARL14EPLP0DKL9 152 aa12.71□□□□□ -0.37
FOXN3-211ENST00000555855 LINC00694P0DN24 101 aa12.71□□□□□ -0.37
FOXN3-211ENST00000555855 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.37
FOXN3-211ENST00000555855 SAMD10Q9BYL1 202 aa12.71□□□□□ -0.37
FOXN3-211ENST00000555855 INMT-MINDY4F8WBC2 141 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 IGLV2-8P01709 118 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 H2BFSP57053 126 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 KRTAP10-4P60372 401 aaPredicted RBP12.7□□□□□ -0.38
FOXN3-211ENST00000555855 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
FOXN3-211ENST00000555855 NIT1Q86X76 327 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 UBE2WQ96B02 151 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 LINC00479Q96M42 142 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 WFDC1Q9HC57 220 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
FOXN3-211ENST00000555855 A0A087WX48 190 aa12.69□□□□□ -0.38
FOXN3-211ENST00000555855 ASIPP42127 132 aa12.69□□□□□ -0.38
FOXN3-211ENST00000555855 CDC34P49427 236 aaPredicted RBP12.69□□□□□ -0.38
FOXN3-211ENST00000555855 C14orf177Q52M58 125 aa12.69□□□□□ -0.38
FOXN3-211ENST00000555855 Q9UF83 564 aa12.69□□□□□ -0.38
FOXN3-211ENST00000555855 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
FOXN3-211ENST00000555855 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
FOXN3-211ENST00000555855 STAG3L2P0CL84 134 aa12.68□□□□□ -0.38
FOXN3-211ENST00000555855 STAG3L3P0CL85 134 aa12.68□□□□□ -0.38
FOXN3-211ENST00000555855 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-211ENST00000555855 JPT2Q9H910 190 aa12.68□□□□□ -0.38
FOXN3-211ENST00000555855 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 RHODO00212 210 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 SSNA1O43805 119 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 Q0VG73 95 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 DNAJC30Q96LL9 226 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 FAT3Q8TDW7 4589 aa12.67□□□□□ -0.38
FOXN3-211ENST00000555855 GCHFRP30047 84 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 OR2G3Q8NGZ4 309 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 RAB24Q969Q5 203 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 TMEM167BQ9NRX6 74 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 IL36BQ9NZH7 164 aa12.66□□□□□ -0.38
FOXN3-211ENST00000555855 RPL37AP61513 92 aaKnown RBP12.65□□□□□ -0.38
FOXN3-211ENST00000555855 UFSP1Q6NVU6 142 aa12.65□□□□□ -0.38
FOXN3-211ENST00000555855 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
FOXN3-211ENST00000555855 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
FOXN3-211ENST00000555855 FAM74A4Q5TZK3 123 aa12.64□□□□□ -0.39
FOXN3-211ENST00000555855 B4DEV8 164 aa12.63□□□□□ -0.39
FOXN3-211ENST00000555855 CXorf1O96002 111 aa12.63□□□□□ -0.39
FOXN3-211ENST00000555855 MBP02144 154 aa12.63□□□□□ -0.39
FOXN3-211ENST00000555855 ATRAIDQ6UW56 229 aa12.63□□□□□ -0.39
FOXN3-211ENST00000555855 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
FOXN3-211ENST00000555855 ARMS2P0C7Q2 107 aa12.62□□□□□ -0.39
FOXN3-211ENST00000555855 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
FOXN3-211ENST00000555855 TRAV34A0A0B4J273 112 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms