RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SPINK8P0C7L1 97 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 ERVS71-1P61550 626 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 REEP5Q00765 189 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 FAM74A4Q5TZK3 123 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 SLC48A1Q6P1K1 146 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 CYP2G1PQ6ZSU1 146 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 C4orf33Q8N1A6 199 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 MORN4Q8NDC4 146 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 OR4S1Q8NGB4 309 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 OTOSQ8NHW6 89 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 GINS3Q9BRX5 216 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 NUBP2Q9Y5Y2 271 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 USP54Q70EL1 1684 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 DLEC1Q9Y238 1755 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 BIVM-ERCC5R4GMW8 1640 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 MAP1LC3B2A6NCE7 125 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 LOC730098B7Z3J9 87 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 PPP5D1E7EU14 171 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 IFNA1P01562 189 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 CRYGSP22914 178 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 SRP9P49458 86 aaKnown RBP-0.87□□□□□ -2.55
SNX6-204ENST00000555541 CRYBA4P53673 196 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 INSL4Q14641 139 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 FAM24BQ8N5W8 94 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 PPDPFLQ8WWR9 84 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 BATF3Q9NR55 127 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 LAMA5O15230 3695 aa-0.87□□□□□ -2.55
SNX6-204ENST00000555541 VIRMAQ69YN4 1812 aaKnown RBP-0.87□□□□□ -2.55
SNX6-204ENST00000555541 UBR2Q8IWV8 1755 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 TECPR2O15040 1411 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 TRGV1A0A0A0MS02 117 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 HBDP02042 147 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 S100A11P31949 105 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 PCBD1P61457 104 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 SSBP1Q04837 148 aaKnown RBP-0.88□□□□□ -2.55
SNX6-204ENST00000555541 TMED2Q15363 201 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 DHRS4L2Q6PKH6 230 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 BRK1Q8WUW1 75 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 LXNQ9BS40 222 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 V9GYV3 84 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 WNK1Q9H4A3 2382 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 TCOF1Q13428 1488 aaKnown RBP-0.88□□□□□ -2.55
SNX6-204ENST00000555541 USH2AO75445 5202 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 VWFP04275 2813 aa-0.88□□□□□ -2.55
SNX6-204ENST00000555541 MAP1AP78559 2803 aaPredicted RBP-0.88□□□□□ -2.55
SNX6-204ENST00000555541 FAM135BQ49AJ0 1406 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 STAB2Q8WWQ8 2551 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 FLNBO75369 2602 aaKnown RBP-0.89□□□□□ -2.55
SNX6-204ENST00000555541 NF1P21359 2839 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 CXorf51AA0A1B0GTR3 108 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 K7EQZ3 153 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 M0QZK8 103 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 DEGS1O15121 323 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 CTXN2P0C2S0 81 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 CCL3L1P16619 93 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 C3orf33Q6P1S2 294 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 COX7B2Q8TF08 81 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 SCP2D1Q9UJQ7 156 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 LAMTOR2Q9Y2Q5 125 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 PPRC1Q5VV67 1664 aaKnown RBP-0.89□□□□□ -2.55
SNX6-204ENST00000555541 PKHD1P08F94 4074 aa-0.89□□□□□ -2.55
SNX6-204ENST00000555541 PNMA8CA0A1B0GUJ8 204 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 AKR1D1P51857 326 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 GNG3P63215 75 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 MRPS25P82663 173 aaKnown RBP-0.9□□□□□ -2.55
SNX6-204ENST00000555541 OR8B8Q15620 311 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 OR2T2Q6IF00 324 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 C20orf197Q8N268 126 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 STX19Q8N4C7 294 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 SMIM20Q8N5G0 67 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 IFI27L1Q96BM0 104 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 LRP5O75197 1615 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 PTPRGP23470 1445 aa-0.9□□□□□ -2.55
SNX6-204ENST00000555541 LAMB1P07942 1786 aa-0.91□□□□□ -2.55
SNX6-204ENST00000555541 C2CD3Q4AC94 2353 aa-0.91□□□□□ -2.55
SNX6-204ENST00000555541 TRBV10-3A0A0K0K1G6 114 aa-0.91□□□□□ -2.56
SNX6-204ENST00000555541 PGRMC1O00264 195 aaKnown RBP-0.91□□□□□ -2.56
SNX6-204ENST00000555541 HSD11B1P28845 292 aa-0.91□□□□□ -2.56
SNX6-204ENST00000555541 TCTAP57738 103 aa-0.91□□□□□ -2.56
SNX6-204ENST00000555541 PARVGQ9HBI0 331 aa-0.91□□□□□ -2.56
SNX6-204ENST00000555541 TAS2R8Q9NYW2 309 aa-0.91□□□□□ -2.56
SNX6-204ENST00000555541 SPCS1Q9Y6A9 102 aa-0.91□□□□□ -2.56
SNX6-204ENST00000555541 FLGP20930 4061 aaPredicted RBP-0.91□□□□□ -2.56
SNX6-204ENST00000555541 NINQ8N4C6 2090 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 FXYD6-FXYD2A0A087WZ82 144 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 APOC4-APOC2K7ER74 178 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 SLC25A6P12236 298 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 MT4P47944 62 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 HRCT1Q6UXD1 115 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 SLC25A26Q70HW3 274 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 CBLN4Q9NTU7 201 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 NDUFAF1Q9Y375 327 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 UFC1Q9Y3C8 167 aa-0.92□□□□□ -2.56
SNX6-204ENST00000555541 EP300Q09472 2414 aaPredicted RBP-0.93□□□□□ -2.56
SNX6-204ENST00000555541 RYR1P21817 5038 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 CSPG4Q6UVK1 2322 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 TRBV7-6A0A0J9YX20 115 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 A0A1B0GW64 132 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 G3V318 75 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 UQCRQO14949 82 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms