RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 C20orf144Q9BQM9 153 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 GOLT1BQ9Y3E0 138 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 NACAE9PAV3 2078 aa7.76□□□□□ -1.17
TDP1-211ENST00000555178 STAB2Q8WWQ8 2551 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 KIR2DL5BA0A0G2JN68 375 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 KIR2DL5BA0A0G2JPC4 375 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 M0R381 172 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 SNAI2O43623 268 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 NTF3P20783 257 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 KIR2DL5AQ8N109 375 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 OVOL2Q9BRP0 275 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 SSBP4Q9BWG4 385 aaPredicted RBP7.75□□□□□ -1.17
TDP1-211ENST00000555178 SCRT2Q9NQ03 307 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 OR5AL1P0C617 328 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 RAB5AP20339 215 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 TMEM256Q8N2U0 113 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 RNASE8Q8TDE3 154 aaKnown RBP7.75□□□□□ -1.17
TDP1-211ENST00000555178 C9orf85Q96MD7 179 aa7.75□□□□□ -1.17
TDP1-211ENST00000555178 TRGV11A0A075B6L2 103 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 PLAC8L1A1L4L8 177 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 TWIST1Q15672 202 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 JPT2Q9H910 190 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 PHLDA3Q9Y5J5 127 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
TDP1-211ENST00000555178 RAB4BP61018 213 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 DNLZQ5SXM8 178 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 SPANXN1Q5VSR9 72 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 RNF183Q96D59 192 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 LINC00467Q9BRT7 94 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
TDP1-211ENST00000555178 TRAV9-1A0A075B6T8 112 aa7.73□□□□□ -1.17
TDP1-211ENST00000555178 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
TDP1-211ENST00000555178 EMP1P54849 157 aa7.73□□□□□ -1.17
TDP1-211ENST00000555178 HBBP68871 147 aa7.73□□□□□ -1.17
TDP1-211ENST00000555178 TMEM136Q6ZRR5 245 aa7.73□□□□□ -1.17
TDP1-211ENST00000555178 OR11H2Q8NH07 326 aa7.73□□□□□ -1.17
TDP1-211ENST00000555178 F2Z2F3 143 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 ZNF415Q09FC8 603 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 TMEM263Q8WUH6 116 aaKnown RBP7.72□□□□□ -1.17
TDP1-211ENST00000555178 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 MRPL16Q9NX20 251 aaKnown RBP7.72□□□□□ -1.17
TDP1-211ENST00000555178 TRGC2P03986 189 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 MED14OSP0DP75 135 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 EVI2AP22794 236 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 SLAQ13239 276 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 RRN3P1Q2M238 152 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 Q6ZWC4 215 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 ATP5L2Q7Z4Y8 100 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 IL17DQ8TAD2 202 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
TDP1-211ENST00000555178 RIGQ13278 110 aa7.71□□□□□ -1.17
TDP1-211ENST00000555178 NOP10Q9NPE3 64 aaKnown RBP7.71□□□□□ -1.17
TDP1-211ENST00000555178 IGHV4-28A0A0C4DH34 117 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 UBE2CO00762 179 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 NXPH4O95158 308 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 FABP9Q0Z7S8 132 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 KIAA1644Q3SXP7 199 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 AMN1Q8IY45 258 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 Q8NAQ8 132 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 FRZBQ92765 325 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 SAMD10Q9BYL1 202 aa7.71□□□□□ -1.18
TDP1-211ENST00000555178 IGHV4-4A0A075B6R2 117 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 A0A087WWL8 130 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 Q6ZTI0 123 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 C14orf178Q8N769 122 aaPredicted RBP7.7□□□□□ -1.18
TDP1-211ENST00000555178 C16orf74Q96GX8 76 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
TDP1-211ENST00000555178 TRAPPC1Q9Y5R8 145 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 PHOX2AO14813 284 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 GAS8-AS1O95177 125 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 CACNG7P62955 275 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 ZFP82Q8N141 532 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 CELA1Q9UNI1 258 aa7.7□□□□□ -1.18
TDP1-211ENST00000555178 TMA7Q9Y2S6 64 aaKnown RBP7.7□□□□□ -1.18
TDP1-211ENST00000555178 TRGV1A0A0A0MS02 117 aa7.69□□□□□ -1.18
TDP1-211ENST00000555178 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
TDP1-211ENST00000555178 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
TDP1-211ENST00000555178 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 TRAV26-2A0A0B4J265 109 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 M0R2P5 195 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 SMKR1H3BMG3 65 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 WDR73Q6P4I2 378 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 RASL11AQ6T310 242 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 ZNF493Q6ZR52 646 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 RNF185Q96GF1 192 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 CSMD3Q7Z407 3707 aa7.68□□□□□ -1.18
TDP1-211ENST00000555178 NCR2O95944 276 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 HLA-DQA1P01909 254 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 APCSP02743 223 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 POM121L12Q8N7R1 296 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 GATD1Q8NB37 220 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 AP1S3Q96PC3 154 aa7.67□□□□□ -1.18
TDP1-211ENST00000555178 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms