RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994		Q6ZTC4	211 aa		3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMED6	Q8WW62	240 aa		3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	MRPL53	Q96EL3	112 aa	Known RBP	3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	NDFIP1	Q9BT67	221 aa		3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	MAP1LC3B	Q9GZQ8	125 aa		3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	C11orf68	Q9H3H3	251 aa	Known RBP	3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	TREM1	Q9NP99	234 aa		3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	ZNF492	Q9P255	531 aa		3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.31	□□□□□ -1.88
ATXN3-231	ENST00000554994	TRGV2	A0A075B6R0	118 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	IGKV2D-30	A0A075B6S6	120 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	TRGV1	A0A0A0MS02	117 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	C16orf90	A8MZG2	172 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994		F6UZH7	168 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	GNRH2	O43555	120 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	PAGE4	O60829	102 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	SEC11B	P0C7V7	166 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	PCP4	P48539	62 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	PPT1	P50897	306 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	UBE2G1	P62253	170 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	ZNF726P1	Q15940	193 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMEM183B	Q1AE95	376 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	UBE2DNL	Q8IWF7	75 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMEM183A	Q8IXX5	376 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	SVBP	Q8N300	66 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	C16orf74	Q96GX8	76 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	LINC00479	Q96M42	142 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	GSN-AS1	Q9NRJ2	163 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	TP53TG3	Q9ULZ0	132 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	EPDR1	Q9UM22	224 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	PSG8	Q9UQ74	426 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	DNAH5	Q8TE73	4624 aa		3.3	□□□□□ -1.88
ATXN3-231	ENST00000554994	IGHV4-4	A0A075B6R2	117 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	IGHV1OR15-1	A0A075B7D0	117 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994		A0A0J9YY99	117 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	TEX48	A0A1B0GUV7	120 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	RBAKDN	A6NC62	111 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	LYRM9	A8MSI8	78 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994		A8MTW9	85 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	EPM2A	B3EWF7	344 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	UMAD1	C9J7I0	102 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	IGHV3-53	P01767	116 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	ORM1	P02763	201 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	TCRA	P04437	139 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	ATP5G1	P05496	136 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	NPS	P0C0P6	89 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	ATP5G3	P48201	142 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	SST	P61278	116 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	S100A12	P80511	92 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	C10orf91	Q5T1B1	145 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	PRR9	Q5T870	116 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	SUMO4	Q6EEV6	95 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	ALKAL2	Q6UX46	152 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	ZNF493	Q6ZR52	646 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	C5orf17	Q8NAS9	161 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMEM263	Q8WUH6	116 aa	Known RBP	3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	C20orf144	Q9BQM9	153 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	PYGO2	Q9BRQ0	406 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	ATG101	Q9BSB4	218 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	NDUFAF3	Q9BU61	184 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	GNG13	Q9P2W3	67 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	KLF12	Q9Y4X4	402 aa		3.29	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMSB15B	A0A087X1C1	80 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	TRAV21	A0A0B4J279	112 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994		A0A1W2PRE2	83 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMEM218	A2RU14	115 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	FAM74A7	A6NL05	159 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	KLLN	B2CW77	178 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994		C9JCJ5	164 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994		M0R2N4	97 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	PEX7	O00628	323 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	ZNF324	O75467	553 aa	Predicted RBP	3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	SNAPIN	O95295	136 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	GCG	P01275	180 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	CRISP2	P16562	243 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	S100A4	P26447	101 aa	Known RBP	3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	AKR1C3	P42330	323 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	CEBPG	P53567	150 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	CCL20	P78556	96 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	ZNF415	Q09FC8	603 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	ANXA2R	Q3ZCQ2	193 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	SAPCD1	Q5SSQ6	148 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	TMEM88	Q6PEY1	159 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	DPPA3	Q6W0C5	159 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994		Q6ZTI0	123 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	ZFAND2A	Q8N6M9	145 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	CYB561D1	Q8N8Q1	229 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	NHLRC2	Q8NBF2	726 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	MBD3L1	Q8WWY6	194 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	TVP23C	Q96ET8	276 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	ODF3	Q96PU9	254 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	SEC11C	Q9BY50	192 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	NKX6-2	Q9C056	277 aa	Predicted RBP	3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	SMDT1	Q9H4I9	107 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	SDF2L1	Q9HCN8	221 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	MRPL16	Q9NX20	251 aa	Known RBP	3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	MDFIC	Q9P1T7	246 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	APLN	Q9ULZ1	77 aa		3.28	□□□□□ -1.88
ATXN3-231	ENST00000554994	RNF213	Q63HN8	5207 aa		3.28	□□□□□ -1.88

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