RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 OR10J6PQ8NGY7 276 aa12.55□□□□□ -0.4
XRCC3-209ENST00000554913 CELSR1Q9NYQ6 3014 aa12.55□□□□□ -0.4
XRCC3-209ENST00000554913 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
XRCC3-209ENST00000554913 SLC25A16P16260 332 aa12.55□□□□□ -0.4
XRCC3-209ENST00000554913 RNASE4P34096 147 aaKnown RBP12.55□□□□□ -0.4
XRCC3-209ENST00000554913 UBTD1Q9HAC8 227 aa12.55□□□□□ -0.4
XRCC3-209ENST00000554913 TSSC4Q9Y5U2 329 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-209ENST00000554913 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
XRCC3-209ENST00000554913 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 PRADC1Q9BSG0 188 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 A0A1B0GWB2 263 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 SOCS3O14543 225 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 AZU1P20160 251 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 C19orf54Q5BKX5 351 aa12.54□□□□□ -0.4
XRCC3-209ENST00000554913 KLRB1Q12918 225 aa12.53□□□□□ -0.4
XRCC3-209ENST00000554913 LY6DQ14210 128 aa12.53□□□□□ -0.4
XRCC3-209ENST00000554913 MORN3Q6PF18 240 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-209ENST00000554913 LINC01619G3V211 115 aa12.53□□□□□ -0.4
XRCC3-209ENST00000554913 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
XRCC3-209ENST00000554913 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
XRCC3-209ENST00000554913 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-209ENST00000554913 PRO0461Q9UI25 63 aa12.53□□□□□ -0.4
XRCC3-209ENST00000554913 FAM223BA6NKX1 122 aa12.52□□□□□ -0.4
XRCC3-209ENST00000554913 OVOL1O14753 267 aa12.52□□□□□ -0.4
XRCC3-209ENST00000554913 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.4
XRCC3-209ENST00000554913 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.4
XRCC3-209ENST00000554913 GAGE12HA6NDE8 117 aa12.52□□□□□ -0.41
XRCC3-209ENST00000554913 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.41
XRCC3-209ENST00000554913 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.41
XRCC3-209ENST00000554913 ZNF815PA8K554 130 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 HOXA3O43365 443 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-209ENST00000554913 DUSP14O95147 198 aaKnown RBP12.51□□□□□ -0.41
XRCC3-209ENST00000554913 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 SMAGPQ0VAQ4 97 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 SCGB2A2Q13296 93 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 CD300EQ496F6 205 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-209ENST00000554913 SIGMAR1Q99720 223 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 MUC4Q99102 2169 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 INSL3P51460 131 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
XRCC3-209ENST00000554913 PGPEP1Q9NXJ5 209 aa12.5□□□□□ -0.41
XRCC3-209ENST00000554913 CRYGDP07320 174 aa12.5□□□□□ -0.41
XRCC3-209ENST00000554913 EMP1P54849 157 aa12.5□□□□□ -0.41
XRCC3-209ENST00000554913 BRD3OSQ6XYD6 125 aa12.5□□□□□ -0.41
XRCC3-209ENST00000554913 FAM19A4Q96LR4 140 aa12.5□□□□□ -0.41
XRCC3-209ENST00000554913 NDUFA4O00483 81 aa12.49□□□□□ -0.41
XRCC3-209ENST00000554913 SCGB1D4Q6XE38 83 aa12.49□□□□□ -0.41
XRCC3-209ENST00000554913 ATP6V0BQ99437 205 aa12.49□□□□□ -0.41
XRCC3-209ENST00000554913 J3QR89 54 aa12.49□□□□□ -0.41
XRCC3-209ENST00000554913 ACACBO00763 2458 aa12.48□□□□□ -0.41
XRCC3-209ENST00000554913 TSHBP01222 138 aa12.48□□□□□ -0.41
XRCC3-209ENST00000554913 COX6B1P14854 86 aa12.48□□□□□ -0.41
XRCC3-209ENST00000554913 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
XRCC3-209ENST00000554913 JPT2Q9H910 190 aa12.48□□□□□ -0.41
XRCC3-209ENST00000554913 MRPL16Q9NX20 251 aaKnown RBP12.48□□□□□ -0.41
XRCC3-209ENST00000554913 ABCA2Q9BZC7 2435 aa12.48□□□□□ -0.41
XRCC3-209ENST00000554913 LINC01549A6NIU2 74 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 MED14OSP0DP75 135 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 SRD5A1P18405 259 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 LINC00315P59091 139 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 SRSF9Q13242 221 aaKnown RBP eCLIP12.47□□□□□ -0.41
XRCC3-209ENST00000554913 IGSF10Q6WRI0 2623 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 KIF25-AS1Q9Y6Z4 181 aa12.47□□□□□ -0.41
XRCC3-209ENST00000554913 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
XRCC3-209ENST00000554913 LY6EQ16553 131 aa12.46□□□□□ -0.41
XRCC3-209ENST00000554913 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
XRCC3-209ENST00000554913 WFDC12Q8WWY7 111 aa12.46□□□□□ -0.41
XRCC3-209ENST00000554913 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
XRCC3-209ENST00000554913 FLNCQ14315 2725 aa12.46□□□□□ -0.42
XRCC3-209ENST00000554913 IGLV4-69A0A075B6H9 119 aa12.46□□□□□ -0.42
XRCC3-209ENST00000554913 SPATA25Q9BR10 227 aa12.46□□□□□ -0.42
XRCC3-209ENST00000554913 RPL39P62891 51 aaKnown RBP12.45□□□□□ -0.42
XRCC3-209ENST00000554913 RHPN1-AS1Q9BWJ2 59 aa12.45□□□□□ -0.42
XRCC3-209ENST00000554913 PPP1R17O96001 155 aa12.45□□□□□ -0.42
XRCC3-209ENST00000554913 UBE2D1P51668 147 aa12.45□□□□□ -0.42
XRCC3-209ENST00000554913 A0A087WWL8 130 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 EDN2P20800 178 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-209ENST00000554913 ZFP2Q6ZN57 461 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 POM121L12Q8N7R1 296 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 IGHV1-69DA0A0B4J2H0 117 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 NXPH4O95158 308 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 IGHV1-69P01742 117 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 PF4V1P10720 104 aa12.44□□□□□ -0.42
XRCC3-209ENST00000554913 A6NJY4 79 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 APOMO95445 188 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 TSPAN13O95857 204 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 Q6ZS46 218 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 PRORYQ9H606 182 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 MAP1AP78559 2803 aaPredicted RBP12.43□□□□□ -0.42
XRCC3-209ENST00000554913 IGHV4OR15-8A0A075B7B6 117 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 A0A087WW49 117 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 LOC107984156A0A0G2JMH3 177 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 NDUFS8O00217 210 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 POLR2KP53803 58 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 462 ms