RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 RNASE4P34096 147 aaKnown RBP2.86□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF138P52744 262 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 TCL1AP56279 114 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 TAS2R45P59539 299 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF266Q14584 549 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 ACOT6Q3I5F7 207 aaPredicted RBP2.86□□□□□ -1.95
VTI1B-203ENST00000554636 RNF212Q495C1 297 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 TMEM78Q5T7P6 136 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 Q6ZTI0 123 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 LYPD1Q8N2G4 141 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 EIF4E3Q8N5X7 224 aaKnown RBP2.86□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF680Q8NEM1 530 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 OR2G3Q8NGZ4 309 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 ZNRF2Q8NHG8 242 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 RXFP4Q8TDU9 374 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 MED28Q9H204 178 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 OTORQ9NRC9 128 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 GSN-AS1Q9NRJ2 163 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 TP53TG3Q9ULZ0 132 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 PYGO1Q9Y3Y4 419 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 LINC00588Q9Y4M8 146 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 KLF12Q9Y4X4 402 aa2.86□□□□□ -1.95
VTI1B-203ENST00000554636 IGHV1OR15-1A0A075B7D0 117 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 TRAV26-1A0A087WT03 109 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 TRGV1A0A0A0MS02 117 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 A0A0J9YY99 117 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 NBDYA0A0U1RRE5 68 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 RNF222A6NCQ9 220 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 HMGB3O15347 200 aaKnown RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 GPX1P07203 203 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 STAG3L2P0CL84 134 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 STAG3L3P0CL85 134 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 ARL14EPLP0DKL9 152 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 ATP6V0CP27449 155 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 CSN1S1P47710 185 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 CDC34P49427 236 aaPredicted RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 RANP62826 216 aaKnown RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 GNG5P63218 68 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 OR5I1Q13606 314 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 IBA57Q5T440 356 aaKnown RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 Q6AWC8 147 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 GOLT1AQ6ZVE7 132 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 SSX7Q7RTT5 188 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 HSD17B11Q8NBQ5 300 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 OR10G4Q8NGN3 311 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 OR10G9Q8NGN4 311 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 OR10G7Q8NGN6 311 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 SUN5Q8TC36 379 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 ASB13Q8WXK3 278 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 TVP23CQ96ET8 276 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 VSIG2Q96IQ7 327 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 OPRPNQ99935 248 aaPredicted RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 ATG101Q9BSB4 218 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 PSMG3Q9BT73 122 aaPredicted RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 SH3BGRL3Q9H299 93 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 MRPL16Q9NX20 251 aaKnown RBP2.85□□□□□ -1.95
VTI1B-203ENST00000554636 TNFSF18Q9UNG2 199 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 LENEPQ9Y5L5 61 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 FAT1Q14517 4588 aa2.85□□□□□ -1.95
VTI1B-203ENST00000554636 A0A096LPF7 62 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 TRAV8-1A0A0A6YYK1 113 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 IGHV3-16A0A0C4DH30 117 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 PGPA6NDG6 321 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 GGTLC3B5MD39 225 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 F6UZH7 168 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 H3BNG1 76 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 GCHFRP30047 84 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 CCL18P55774 89 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF415Q09FC8 603 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 ZNF726P1Q15940 193 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 ESRGQ1W209 222 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 MUC21Q5SSG8 566 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 RPL7L1Q6DKI1 246 aaKnown RBP2.84□□□□□ -1.95
VTI1B-203ENST00000554636 ARL6IP6Q8N6S5 226 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 CMTM2Q8TAZ6 248 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 GNPNAT1Q96EK6 184 aaPredicted RBP2.84□□□□□ -1.95
VTI1B-203ENST00000554636 HYLS1Q96M11 299 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 LINC00479Q96M42 142 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 RPH3ALQ9UNE2 315 aa2.84□□□□□ -1.95
VTI1B-203ENST00000554636 MRPS16Q9Y3D3 137 aaKnown RBP2.84□□□□□ -1.95
VTI1B-203ENST00000554636 TRGV2A0A075B6R0 118 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 FXYD6-FXYD2A0A087WZ82 144 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TRAV21A0A0B4J279 112 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 SERTM2A0A1B0GWG4 89 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 A0A1W2PPV4 95 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 SMLR1H3BR10 107 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 IGHV3-53P01767 116 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 MBP02144 154 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TCRAP04437 139 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TYMSP04818 313 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 ZNF80P51504 273 aaPredicted RBP2.83□□□□□ -1.96
VTI1B-203ENST00000554636 CRYBA4P53673 196 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 SERF2P84101 59 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TMEM183BQ1AE95 376 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 RGS21Q2M5E4 152 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms