RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PITX3O75364 302 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV3-7P01780 117 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SLC25A5P05141 298 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SEC11BP0C7V7 166 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SLC25A4P12235 298 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MPV17P39210 176 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MUC21Q5SSG8 566 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 Q6ZR03 302 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MKXQ8IYA7 352 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C6orf223Q8N319 242 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RPP25LQ8N5L8 163 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RNF182Q8N6D2 247 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TIMM17AQ99595 171 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 COMMD5Q9GZQ3 224 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 C11orf21Q9P2W6 132 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 PLXNB1O43157 2135 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TRBV19A0A075B6N1 114 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV1-69DA0A0B4J2H0 117 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 HMSDA8MTL9 139 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 H3BMG7 143 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 UQCRQO14949 82 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 DUSP14O95147 198 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LHBP01229 141 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV1-69P01742 117 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 TRACP01848 142 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 FCGR3AP08637 254 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 PYYP10082 97 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF823P16415 610 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SNRPD3P62318 126 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 SUPT4H1P63272 117 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CCL8P80075 99 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 Q0VG73 95 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 ERCC8Q13216 396 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MPV17LQ2QL34 196 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 MPV17L2Q567V2 206 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 COA6Q5JTJ3 125 aaKnown RBP2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR10P1Q8NGE3 313 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR8B3Q8NGG8 313 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR10AG1Q8NH19 301 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LINC01006Q8NI28 216 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00526Q96FQ7 95 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 RNF185Q96GF1 192 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 OR8B2Q96RD0 313 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CHCHD5Q9BSY4 110 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 GNB4Q9HAV0 340 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 CYTL1Q9NRR1 136 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 GNG13Q9P2W3 67 aa2.04□□□□□ -2.08
PRPF39-206ENST00000554429 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 C9orf118A6NHY6 69 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 C12orf77C9JDV5 145 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 TMEM262E9PQX1 116 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 H3BUT2 72 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LST1O00453 97 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF73O43830 326 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SSSCA1O60232 199 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IL5P05113 134 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 P0DMU3 169 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 FAM231AP0DMU4 169 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 FAM231CP0DMU5 169 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV4-38-2P0DP08 117 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF20P17024 532 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF32P17041 273 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 MP68P56378 58 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00313P59037 77 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 YPEL3P61236 119 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 DEFB112Q30KQ8 113 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 PIGYQ3MUY2 71 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ETDBQ3ZM63 59 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 BVES-AS1Q5T3Y7 98 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 FAM53AQ6NSI3 398 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 REG3GQ6UW15 175 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 DPPA3Q6W0C5 159 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SH2D6Q7Z4S9 175 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 OR5AS1Q8N127 324 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 WFDC9Q8NEX5 89 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 NUP35Q8NFH5 326 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 OR5H2Q8NGV7 314 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 OR51H1Q8NH63 302 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 VSTM2AQ8TAG5 236 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IL1F10Q8WWZ1 152 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 PRELID3AQ96N28 172 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SLC35B3Q9H1N7 401 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 HHLA3Q9XRX5 114 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 TIMM8BQ9Y5J9 83 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IGLV9-49A0A0B4J1Y8 123 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IZUMO1RA6ND01 250 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 NAP1L6A6NFF2 107 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 E9PLD3 99 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 F8W1H4 67 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 TFF1P04155 84 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IAPPP10997 89 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 VDAC1P21796 283 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 GATA2P23769 480 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 PSMB8P28062 276 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms