RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
PTCD2P1-201ENST00000554393 MAP1LC3B2A6NCE7 125 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 K7EP13 123 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 K7EQD1 137 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 NXPH4O95158 308 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 SEC11BP0C7V7 166 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 FHITP49789 147 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 FGF8P55075 233 aaPredicted RBP7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 PIK3CD-AS1Q5SR53 167 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 LYPD5Q6UWN5 251 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 SH2D6Q7Z4S9 175 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 Q86TA4 180 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 TXNDC17Q9BRA2 123 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 MAP1LC3BQ9GZQ8 125 aa7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
PTCD2P1-201ENST00000554393 A0A0D9SG52 128 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 UMAD1C9J7I0 102 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 GYPEP15421 78 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 UBE2G2P60604 165 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 COX8CQ7Z4L0 72 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 LINC00479Q96M42 142 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 KRTAP4-12Q9BQ66 201 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
PTCD2P1-201ENST00000554393 TRAV34A0A0B4J273 112 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 TRBV6-1A0A0K0K1D8 114 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 SMLR1H3BR10 107 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 RS1O15537 224 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 RNASE3P12724 160 aaKnown RBP7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 TIRAPP58753 221 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 LINC00315P59091 139 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 EIF5AP63241 154 aaKnown RBP7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 OR11H4Q8NGC9 324 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
PTCD2P1-201ENST00000554393 TRAV9-2A0A087WT02 112 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 TRBV6-4A0A1B0GX49 114 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 KANTRA0A1W2PQU2 76 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 BCL2L11O43521 198 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 RHOHQ15669 191 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 ZNF506Q5JVG8 444 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 DNLZQ5SXM8 178 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 MBD3L1Q8WWY6 194 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 LY96Q9Y6Y9 160 aa7.1□□□□□ -1.27
PTCD2P1-201ENST00000554393 PGPEP1LA6NFU8 196 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 A8MWV9 139 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 DNAH10OSP0CZ25 163 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 MGST1P10620 155 aaKnown RBP7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 S100A4P26447 101 aaKnown RBP7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 ASIPP42127 132 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 UBE2G1P62253 170 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 ZFP2Q6ZN57 461 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 Q6ZRN7 208 aaPredicted RBP7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 SLC25A29Q8N8R3 303 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 PRADC1Q9BSG0 188 aa7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 ZNF471Q9BX82 626 aaPredicted RBP7.09□□□□□ -1.27
PTCD2P1-201ENST00000554393 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 B4DEV8 164 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 LTAP01374 205 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 S100A9P06702 114 aaKnown RBP7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 EVI2AP22794 236 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 LGALSLQ3ZCW2 172 aaPredicted RBP7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 CST9LP1Q5W188 147 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 WFDC10BQ8IUB3 73 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 NHLRC2Q8NBF2 726 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 FAM213BQ8TBF2 198 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 ZC2HC1AQ96GY0 325 aa7.08□□□□□ -1.28
PTCD2P1-201ENST00000554393 LOC100131303A0A0U1RQF7 123 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 KRBOX1C9JBD0 128 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 PAGE4O60829 102 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 SH2D1AO60880 128 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 PFDN1O60925 122 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 TPT1P13693 172 aaKnown RBP7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 AKR1C3P42330 323 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 CRIP1P50238 77 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 ZNF674Q2M3X9 581 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 SPATA12Q7Z6I5 190 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 PARLQ9H300 379 aa7.07□□□□□ -1.28
PTCD2P1-201ENST00000554393 CDK2AP2O75956 126 aa7.06□□□□□ -1.28
PTCD2P1-201ENST00000554393 TMUB2Q71RG4 321 aa7.06□□□□□ -1.28
PTCD2P1-201ENST00000554393 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
PTCD2P1-201ENST00000554393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.06□□□□□ -1.28
PTCD2P1-201ENST00000554393 TRAV8-6A0A0B4J262 113 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 IGHV3-38A0A0C4DH36 116 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 H3BVH4 76 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 RHODO00212 210 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 RAB5CP51148 216 aa7.05□□□□□ -1.28
PTCD2P1-201ENST00000554393 ERVFC1-1P60608 527 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms