RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CLEC2BQ92478 149 aa7.25□□□□□ -1.25
SIX4-202ENST00000554079 NBEAQ8NFP9 2946 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 WDFY3Q8IZQ1 3526 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 IGHV7-4-1A0A0J9YVY3 117 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 RPL35AP18077 110 aaKnown RBP7.24□□□□□ -1.25
SIX4-202ENST00000554079 PFN2P35080 140 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 UBE2E1P51965 193 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 PMS2CLQ68D20 193 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 TMEM86BQ8N661 226 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 DPH3P1Q9H4G8 78 aa7.24□□□□□ -1.25
SIX4-202ENST00000554079 IGHV4-4A0A075B6R2 117 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 IGKV3D-20A0A0C4DH25 116 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 I3L2K1 104 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 RS1O15537 224 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 EDN2P20800 178 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 SUMO2P61956 95 aaKnown RBP7.23□□□□□ -1.25
SIX4-202ENST00000554079 RPL18AQ02543 176 aaKnown RBP7.23□□□□□ -1.25
SIX4-202ENST00000554079 ZNF491Q8N8L2 437 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 C1orf43Q9BWL3 253 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 PEMTQ9UBM1 199 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 TECTAO75443 2155 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 PRRC2AP48634 2157 aaKnown RBP7.23□□□□□ -1.25
SIX4-202ENST00000554079 MALRD1Q5VYJ5 2156 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 LGALS3P17931 250 aaKnown RBP7.23□□□□□ -1.25
SIX4-202ENST00000554079 DEFB119Q8N690 84 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 DNAJC13O75165 2243 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 ZNF318Q5VUA4 2279 aa7.23□□□□□ -1.25
SIX4-202ENST00000554079 EPM2AB3EWF7 344 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 APELAP0DMC3 54 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 RPL27AP46776 148 aaKnown RBP7.22□□□□□ -1.25
SIX4-202ENST00000554079 CCL8P80075 99 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 IL11RAQ14626 422 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 NSUN5P1Q3KNT7 163 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 VMA21Q3ZAQ7 101 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 TMEM105Q8N8V8 129 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 RNF125Q96EQ8 232 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 SLC50A1Q9BRV3 221 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 LAMA1P25391 3075 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 FRYQ5TBA9 3013 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 VPS13AQ96RL7 3174 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 LEPROTO15243 131 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 CD59P13987 128 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 C10orf105Q8TEF2 133 aa7.22□□□□□ -1.25
SIX4-202ENST00000554079 IGHV1-69DA0A0B4J2H0 117 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 A0A0J9YX75 114 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 IGIPA6NJ69 53 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 LHBP01229 141 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 RHOHQ15669 191 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 C9orf85Q96MD7 179 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 TIMM21Q9BVV7 248 aa7.21□□□□□ -1.26
SIX4-202ENST00000554079 WDR87Q6ZQQ6 2873 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 TEX22C9J3V5 150 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 COX6CP09669 75 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 Q6ZT83 130 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 RPL39LQ96EH5 51 aaKnown RBP7.2□□□□□ -1.26
SIX4-202ENST00000554079 PRORYQ9H606 182 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 PKIGQ9Y2B9 76 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 SDHAF1A6NFY7 115 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 I3L3M4 83 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 Q0VFX4 171 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 GAFA1Q96PS6 74 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 LITAFQ99732 161 aa7.2□□□□□ -1.26
SIX4-202ENST00000554079 CFAP54Q96N23 3096 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 WDFY4Q6ZS81 3184 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 ZNF876PQ49A33 203 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 DYNAPQ8N1N2 210 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 MBD3L2Q8NHZ7 208 aaPredicted RBP7.19□□□□□ -1.26
SIX4-202ENST00000554079 ARHGAP32A7KAX9 2087 aa7.19□□□□□ -1.26
SIX4-202ENST00000554079 IGHV1OR15-9A0A0B4J2B8 117 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 A0A0J9YXY3 114 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 K7EIM0 57 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 DLX1P56177 255 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 Q6ZSV7 163 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 SLC25A45Q8N413 288 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 LINC00311Q8N616 119 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 IGHV5-10-1A0A0J9YXX1 117 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 NDUFC2-KCTD14E9PQ53 114 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 M0R381 172 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 PSMB8P28062 276 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 IGFL4Q6B9Z1 124 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 DAND5Q8N907 189 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 PRSS33Q8NF86 280 aa7.18□□□□□ -1.26
SIX4-202ENST00000554079 ABCA1O95477 2261 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 IGKV3-15P01624 115 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 ZNF415Q09FC8 603 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 SPANXN1Q5VSR9 72 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 COL27A1Q8IZC6 1860 aaPredicted RBP7.17□□□□□ -1.26
SIX4-202ENST00000554079 TP53TG1Q9Y2A0 90 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 C22orf24Q9Y442 160 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 SMAD5-AS1Q9Y6J3 95 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 IGHV3OR16-10A0A075B7F0 116 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 PRAC2D3DTV9 90 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 LYZL6O75951 148 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 AVPP01185 164 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 FAM27E3Q08E93 113 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 FHL2Q14192 279 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms