RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 PPP5D1E7EU14 171 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 M0QZK8 103 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 M0R129 80 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 HMGN4O00479 90 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 HCRTO43612 131 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 GGCTO75223 188 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SIX6O95475 246 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 IGF2P01344 180 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 PMP2P02689 132 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 ANGP03950 147 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 HMGN2P05204 90 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 CSN2P05814 226 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 NMBP08949 121 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 OR4E1P0C645 316 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 FGF7P21781 194 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 HIST1H1TP22492 207 aaPredicted RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 HSD11B1P28845 292 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SNCAP37840 140 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SRP9P49458 86 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 CAV3P56539 151 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 PKIAP61925 76 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 UBE2IP63279 158 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 EIF3IQ13347 325 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SURF2Q15527 256 aaPredicted RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 IQCJQ1A5X6 159 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 ACOT6Q3I5F7 207 aaPredicted RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 TMEM128Q5BJH2 165 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 AADACL3Q5VUY0 350 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SLC48A1Q6P1K1 146 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 DPPA3Q6W0C5 159 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 Q6ZS49 121 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 AAED1Q7RTV5 226 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 LYG2Q86SG7 212 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 ANKRD29Q8N6D5 301 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 MORN4Q8NDC4 146 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 PLPP5Q8NEB5 264 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SLC30A7Q8NEW0 376 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 OR4E2Q8NGC2 313 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 OR5D14Q8NGL3 314 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 THEM6Q8WUY1 208 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 C11orf40Q8WZ69 217 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 KLK6Q92876 244 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 MALSU1Q96EH3 234 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 GPER1Q99527 375 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 TAF9BQ9HBM6 251 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 PRTFDC1Q9NRG1 225 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 UQCC1Q9NVA1 299 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 METTL1Q9UBP6 276 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 CACFD1Q9UGQ2 172 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 TNFSF18Q9UNG2 199 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 SOX21Q9Y651 276 aaPredicted RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 V9GYS6 101 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 NBASA2RRP1 2371 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 CACNA1EQ15878 2313 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 DOCK5Q9H7D0 1870 aa1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 NYNRINQ9P2P1 1898 aaKnown RBP1.22□□□□□ -2.21
EFCAB11-204ENST00000553871 AKAP13Q12802 2813 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 CSPG4Q6UVK1 2322 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 ZNF469Q96JG9 3925 aaPredicted RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 COL6A6A6NMZ7 2263 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 IGKV2-40A0A087WW87 121 aaPredicted RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 A0A087WWC5 75 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 IGKV3D-7A0A0C4DH55 119 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 IGKV3OR2-268A0A0C4DH90 116 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 DUXBA0A1W2PPF3 345 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 C9orf170A2RU37 121 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 TRAPPC2LH3BP13 241 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 RPP14O95059 124 aaKnown RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 SFT2D2O95562 160 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 MPC2O95563 127 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 IGKV2D-40P01614 121 aaPredicted RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HLA-DRB1P01911 266 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 CD3DP04234 171 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 APODP05090 189 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 CRHP06850 196 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 CD14P08571 375 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 SFTA3P0C7M3 94 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 ARL14EPLP0DKL9 152 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HMGA1P17096 107 aaKnown RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST1H2BOP23527 126 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 NFYBP25208 207 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 FKBP2P26885 142 aaKnown RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST1H2BBP33778 126 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 RBP2P50120 134 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 FXYD6P3P58550 94 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST1H2BDP58876 126 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST1H2BCP62807 126 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 SUPT4H1P63272 117 aaKnown RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST1H3AP68431 136 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 BTG2P78543 158 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST2H2BEQ16778 126 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 Q5BKY6 102 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 TMEM91Q6ZNR0 172 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 SMIM15Q7Z3B0 74 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 TRAPPC6BQ86SZ2 158 aa1.21□□□□□ -2.22
EFCAB11-204ENST00000553871 GKN2Q86XP6 184 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms