RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 RS1O15537 224 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 CDK2AP2O75956 126 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
FOXN3-204ENST00000553840 FHITP49789 147 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 C9orf62Q8N4C0 152 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 LINC00479Q96M42 142 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 KRTAP17-1Q9BYP8 105 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 UMAD1C9J7I0 102 aa12.07□□□□□ -0.48
FOXN3-204ENST00000553840 UBE2G1P62253 170 aa12.07□□□□□ -0.48
FOXN3-204ENST00000553840 RHOHQ15669 191 aa12.07□□□□□ -0.48
FOXN3-204ENST00000553840 SLC51BQ86UW2 128 aa12.07□□□□□ -0.48
FOXN3-204ENST00000553840 WFDC10BQ8IUB3 73 aa12.07□□□□□ -0.48
FOXN3-204ENST00000553840 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
FOXN3-204ENST00000553840 LOC100131303A0A0U1RQF7 123 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
FOXN3-204ENST00000553840 ASIPP42127 132 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 NKX2-5P52952 324 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-204ENST00000553840 ERVFC1-1P60608 527 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 EIF5AL1Q6IS14 154 aaKnown RBP12.06□□□□□ -0.48
FOXN3-204ENST00000553840 Q6ZRN7 208 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-204ENST00000553840 C10orf126Q8N4M7 172 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 SLC25A29Q8N8R3 303 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 ZFP30Q9Y2G7 519 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 KIAA1109Q2LD37 5005 aa12.06□□□□□ -0.48
FOXN3-204ENST00000553840 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
FOXN3-204ENST00000553840 TIRAPP58753 221 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 Q86TA4 180 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 FMC1Q96HJ9 113 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
FOXN3-204ENST00000553840 IGHV3-73A0A0B4J1V6 119 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 A8MWV9 139 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 CST9LP1Q5W188 147 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 SFT2D1Q8WV19 159 aa12.04□□□□□ -0.48
FOXN3-204ENST00000553840 IGKV3D-20A0A0C4DH25 116 aa12.03□□□□□ -0.48
FOXN3-204ENST00000553840 A0A1B0GV50 99 aa12.03□□□□□ -0.48
FOXN3-204ENST00000553840 B4DEV8 164 aa12.03□□□□□ -0.48
FOXN3-204ENST00000553840 CRYGDP07320 174 aa12.03□□□□□ -0.48
FOXN3-204ENST00000553840 KRTAP10-2P60368 255 aa12.03□□□□□ -0.48
FOXN3-204ENST00000553840 TNFRSF18Q9Y5U5 241 aa12.03□□□□□ -0.48
FOXN3-204ENST00000553840 IGHV3-38A0A0C4DH36 116 aa12.02□□□□□ -0.49
FOXN3-204ENST00000553840 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.49
FOXN3-204ENST00000553840 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.49
FOXN3-204ENST00000553840 SYT8Q8NBV8 401 aa12.02□□□□□ -0.49
FOXN3-204ENST00000553840 PGPEP1Q9NXJ5 209 aa12.02□□□□□ -0.49
FOXN3-204ENST00000553840 IL36BQ9NZH7 164 aa12.02□□□□□ -0.49
FOXN3-204ENST00000553840 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
FOXN3-204ENST00000553840 FAM162BQ5T6X4 162 aa12.01□□□□□ -0.49
FOXN3-204ENST00000553840 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
FOXN3-204ENST00000553840 MBD3L1Q8WWY6 194 aa12.01□□□□□ -0.49
FOXN3-204ENST00000553840 ZC2HC1AQ96GY0 325 aa12.01□□□□□ -0.49
FOXN3-204ENST00000553840 DNAH11Q96DT5 4516 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 TRBV6-1A0A0K0K1D8 114 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 AKR1C3P42330 323 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 RAB5CP51148 216 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 MAPKAPK5-AS1Q8N8E1 139 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 PARLQ9H300 379 aa12□□□□□ -0.49
FOXN3-204ENST00000553840 KRBOX1C9JBD0 128 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 H3BVH4 76 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 M0R036 132 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 SH2D1AO60880 128 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 SULT1A2P50226 295 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 LINC01556Q5JQF7 62 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 DNLZQ5SXM8 178 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 CDPF1Q6NVV7 123 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 GTSF1LQ9H1H1 148 aa11.99□□□□□ -0.49
FOXN3-204ENST00000553840 PAGE4O60829 102 aa11.98□□□□□ -0.49
FOXN3-204ENST00000553840 LTAP01374 205 aa11.98□□□□□ -0.49
FOXN3-204ENST00000553840 S100A9P06702 114 aaKnown RBP11.98□□□□□ -0.49
FOXN3-204ENST00000553840 ARMS2P0C7Q2 107 aa11.98□□□□□ -0.49
FOXN3-204ENST00000553840 CRIP1P50238 77 aa11.98□□□□□ -0.49
FOXN3-204ENST00000553840 LELP1Q5T871 98 aa11.98□□□□□ -0.49
FOXN3-204ENST00000553840 PHLDA3Q9Y5J5 127 aa11.98□□□□□ -0.49
FOXN3-204ENST00000553840 DYNC1H1Q14204 4646 aaKnown RBP11.98□□□□□ -0.49
FOXN3-204ENST00000553840 A0A087WTM6 91 aa11.97□□□□□ -0.49
FOXN3-204ENST00000553840 RHODO00212 210 aa11.97□□□□□ -0.49
FOXN3-204ENST00000553840 PSCAO43653 123 aa11.97□□□□□ -0.49
FOXN3-204ENST00000553840 ZNF674Q2M3X9 581 aa11.97□□□□□ -0.49
FOXN3-204ENST00000553840 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.49
FOXN3-204ENST00000553840 LINC01559Q495D7 138 aa11.96□□□□□ -0.49
FOXN3-204ENST00000553840 ALKAL2Q6UX46 152 aa11.96□□□□□ -0.49
FOXN3-204ENST00000553840 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 GAGE1Q13065 139 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 GAGE4Q13068 117 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 GAGE5Q13069 117 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
FOXN3-204ENST00000553840 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
FOXN3-204ENST00000553840 IBA57-AS1B1ANH7 110 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms