RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PGPA6NDG6 321 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 A6NJ64 397 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 H3BRN7 92 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 GPX1P07203 203 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 FABP5Q01469 135 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 RHOHQ15669 191 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 SPACA4Q8TDM5 124 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 SLC25A38Q96DW6 304 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 LINC00477Q96M19 166 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 HIGD1AQ9Y241 93 aa3.54□□□□□ -1.84
ATXN3-223ENST00000553686 A0A087WX48 190 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 C3orf85A0A1B0GTC6 90 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 LINC00854A0A1B0GVQ3 168 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 HYPMO75409 117 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 B3GALNT1O75752 331 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 NMBP08949 121 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 PGAM2P15259 253 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 RND3P61587 244 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 VBP1P61758 197 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 POLR2GP62487 172 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATXN3-223ENST00000553686 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
ATXN3-223ENST00000553686 AKAP14Q86UN6 197 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 NIT1Q86X76 327 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 CHCHD7Q9BUK0 85 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 FXYD6Q9H0Q3 95 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 PXMP4Q9Y6I8 212 aa3.53□□□□□ -1.84
ATXN3-223ENST00000553686 SMIM30A4D0T7 59 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 FBLL1A6NHQ2 334 aaKnown RBP3.52□□□□□ -1.85
ATXN3-223ENST00000553686 FAM25AB3EWG3 89 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 FAM25CB3EWG5 89 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 FAM25GB3EWG6 89 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 IFNA7P01567 189 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 OR5G3P0C626 314 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 OR4E1P0C645 316 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 NCS1P62166 190 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 RAB11AP62491 216 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 IFITM3Q01628 133 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 MLLT11Q13015 90 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-223ENST00000553686 BTN1A1Q13410 526 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 TMEM183AQ8IXX5 376 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 TMEM75Q8N9X5 138 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 LYPD6BQ8NI32 183 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 LHFPL5Q8TAF8 219 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 MARCH1Q8TCQ1 289 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 AP3S1Q92572 193 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 DNAJC30Q96LL9 226 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 TP53RKQ96S44 253 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 MGLLQ99685 303 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 RABL2AQ9UBK7 228 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-223ENST00000553686 RABL2BQ9UNT1 228 aa3.52□□□□□ -1.85
ATXN3-223ENST00000553686 LSM2Q9Y333 95 aaKnown RBP3.52□□□□□ -1.85
ATXN3-223ENST00000553686 TRAV1-1A0A0B4J248 108 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 A0A0G2JRQ6 117 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 MEIS3P1A6NDR6 274 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 M0R2P5 195 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 HLA-DQA1P01909 254 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 CRPP02741 224 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 IL5P05113 134 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 CHTF8P0CG12 524 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 CRISP2P16562 243 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 HLA-DMAP28067 261 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 RCVRNP35243 200 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 PIGPP57054 158 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 MAJINQ3KP22 176 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 ZNF506Q5JVG8 444 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 MUC21Q5SSG8 566 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 Q6ZQT7 251 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 ACOT7LQ6ZUV0 252 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 BPIFA4PQ86YQ2 179 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 CYB561D1Q8N8Q1 229 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 DTD1Q8TEA8 209 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 SRRQ9GZT4 340 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 NDUFB11Q9NX14 153 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 COPZ2Q9P299 210 aa3.51□□□□□ -1.85
ATXN3-223ENST00000553686 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 LOC100506127A0A0U1RQW1 187 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 CENPXA8MT69 81 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 ZNF253O75346 499 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 CDS2O95674 445 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 TCRBP04435 133 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 MGST1P10620 155 aaKnown RBP3.5□□□□□ -1.85
ATXN3-223ENST00000553686 SDC2P34741 201 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 LSM3P62310 102 aaKnown RBP3.5□□□□□ -1.85
ATXN3-223ENST00000553686 SELENOTP62341 195 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 Q1RN00 199 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 SP6Q3SY56 376 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 SLC39A9Q9NUM3 307 aa3.5□□□□□ -1.85
ATXN3-223ENST00000553686 TRDV1A0A1B0GX56 115 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 SULT1A3P0DMM9 295 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 SULT1A4P0DMN0 295 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 CRYGAP11844 174 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 FGF8P55075 233 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-223ENST00000553686 PLP1P60201 277 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 ERCC8Q13216 396 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 TMEM78Q5T7P6 136 aa3.49□□□□□ -1.85
ATXN3-223ENST00000553686 FAM159AQ6UWV7 190 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms