RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 NAV2Q8IVL1 2488 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 POLQO75417 2590 aa4.48□□□□□ -1.69
VIPAS39-204ENST00000553576 A0A096LNJ9 63 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 DNAJC9-AS1A6NH13 148 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 F6UB75 175 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 K7EMI3 77 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 TNFRSF6BO95407 300 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 NPYP01303 97 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 CSN3P07498 182 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 RNASE3P12724 160 aaKnown RBP4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 SRD5A1P18405 259 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 EVI2AP22794 236 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 TSPOP30536 169 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 RNASE4P34096 147 aaKnown RBP4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 ASIPP42127 132 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 PRR31Q5SQ13 230 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 SPANXN1Q5VSR9 72 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 FOXI2Q6ZQN5 318 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 Q6ZQT7 251 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 Q8N8P6 123 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 NRACQ8N912 160 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 OR11H1Q8NG94 326 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 OR9G4Q8NGQ1 327 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 OR1N2Q8NGR9 330 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 DPF1Q92782 380 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 CLUHP3Q96NS8 147 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 JMJD8Q96S16 334 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 MAP1LC3AQ9H492 121 aa4.47□□□□□ -1.69
VIPAS39-204ENST00000553576 CREBBPQ92793 2442 aa4.46□□□□□ -1.69
VIPAS39-204ENST00000553576 IGKV3-7A0A075B6H7 116 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 TRAV25A0A0B4J276 109 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 MUC21A0A0G2JKD1 596 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 MUC21A0A140T8X8 626 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 C7orf71A4D174 169 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 H3BVH4 76 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 M0R381 172 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 GNRH2O43555 120 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 PPP1R17O96001 155 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 HBDP02042 147 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 IGLC3P0DOY3 106 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 S100A4P26447 101 aaKnown RBP4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 FCER1GP30273 86 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 CDKN1BP46527 198 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 DEFB1P60022 68 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 FHL3Q13643 280 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 LGALS9BQ3B8N2 356 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 SPATA45Q537H7 98 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 PSMG4Q5JS54 123 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 LGALS9CQ6DKI2 356 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 HIST2H2BCQ6DN03 193 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 AMTNQ6UX39 209 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 C18orf65Q6ZTR6 163 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 LINC00173Q6ZV60 143 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 LURAP1LQ8IV03 231 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 OR2K2Q8NGT1 345 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 C9orf85Q96MD7 179 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 C20orf78Q9BR46 151 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 C2orf88Q9BSF0 95 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 ESM1Q9NQ30 184 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 UQCR10Q9UDW1 63 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 PAM16Q9Y3D7 125 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 ABCA12Q86UK0 2595 aa4.46□□□□□ -1.7
VIPAS39-204ENST00000553576 ITPR3Q14573 2671 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 LOC389332A0A1B0GUA5 103 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 OR4C46A6NHA9 309 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 SMKR1H3BMG3 65 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 NDUFA7O95182 113 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 ZNF688P0C7X2 276 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 LINC00315P59091 139 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 SSTP61278 116 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 DEFB114Q30KQ6 69 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 PIK3CD-AS1Q5SR53 167 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 FAM159AQ6UWV7 190 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 ZNF705AQ6ZN79 300 aaPredicted RBP4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 DLX4Q92988 240 aaPredicted RBP4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 PTH2Q96A98 100 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 DUX5Q96PT3 197 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 PHLDA3Q9Y5J5 127 aa4.45□□□□□ -1.7
VIPAS39-204ENST00000553576 CENPEQ02224 2701 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 IGHV1OR15-1A0A075B7D0 117 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 IGHV3-16A0A0C4DH30 117 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 H3BMM0 161 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 M0R143 59 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 GAS8-AS1O95177 125 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 HLA-DRB4P13762 266 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 IGLL1P15814 213 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 GATA1P15976 413 aaPredicted RBP4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 HILS1P60008 231 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 LINC01006Q8NI28 216 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 ZNF418Q8TF45 676 aaPredicted RBP4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 SPAG8Q99932 426 aaPredicted RBP4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 LINC00467Q9BRT7 94 aa4.44□□□□□ -1.7
VIPAS39-204ENST00000553576 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms