RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PSG8Q9UQ74 426 aa8.09□□□□□ -1.11
SRP54-203ENST00000553544 TRAV1-1A0A0B4J248 108 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 IGLV2-11P01706 119 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
SRP54-203ENST00000553544 FUSP35637 526 aaKnown RBP eCLIP8.08□□□□□ -1.12
SRP54-203ENST00000553544 ERVFC1-1P60608 527 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 FHL2Q14192 279 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 TMEM183BQ1AE95 376 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
SRP54-203ENST00000553544 TMEM183AQ8IXX5 376 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 SPXQ9BT56 116 aa8.08□□□□□ -1.12
SRP54-203ENST00000553544 FAT1Q14517 4588 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 IGHV3-16A0A0C4DH30 117 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 GNRH2O43555 120 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 PFN1P07737 140 aaKnown RBP8.07□□□□□ -1.12
SRP54-203ENST00000553544 CRYBA4P53673 196 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 SLAQ13239 276 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 PRNTQ86SH4 94 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 SGK494Q96LW2 274 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 SDF2L1Q9HCN8 221 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 PRO0255Q9UI72 69 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 HHLA3Q9XRX5 114 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 ZFP30Q9Y2G7 519 aa8.07□□□□□ -1.12
SRP54-203ENST00000553544 PAX4O43316 350 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 PAGE4O60829 102 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 GCGP01275 180 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 IGHV3-53P01767 116 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 ZNF80P51504 273 aaPredicted RBP8.06□□□□□ -1.12
SRP54-203ENST00000553544 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 BLOC1S1P78537 153 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 Q86TA4 180 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 NAGKQ9UJ70 344 aa8.06□□□□□ -1.12
SRP54-203ENST00000553544 TRBV6-1A0A0K0K1D8 114 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 SIVA1O15304 175 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 TYMSP04818 313 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 ZNF479Q96JC4 524 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
SRP54-203ENST00000553544 A0A1B0GV50 99 aa8.04□□□□□ -1.12
SRP54-203ENST00000553544 M0R2P5 195 aa8.04□□□□□ -1.12
SRP54-203ENST00000553544 PDE6DO43924 150 aa8.04□□□□□ -1.12
SRP54-203ENST00000553544 SFTA3P0C7M3 94 aa8.04□□□□□ -1.12
SRP54-203ENST00000553544 GNG13Q9P2W3 67 aa8.04□□□□□ -1.12
SRP54-203ENST00000553544 ICOSQ9Y6W8 199 aa8.04□□□□□ -1.12
SRP54-203ENST00000553544 TRAV9-2A0A087WT02 112 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 A0A087WTM6 91 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 A0A1B0GVG6 124 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 FABP5P3A8MUU1 101 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 GCSHP23434 173 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 MRPL23Q16540 153 aaKnown RBP8.03□□□□□ -1.12
SRP54-203ENST00000553544 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 Q6ZSN1 163 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 LINC00479Q96M42 142 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 TNFRSF18Q9Y5U5 241 aa8.03□□□□□ -1.12
SRP54-203ENST00000553544 TRAV34A0A0B4J273 112 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 K7EQD1 137 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 LTAP01374 205 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 BCL2P10415 239 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 MEF2BQ02080 365 aaPredicted RBP8.02□□□□□ -1.13
SRP54-203ENST00000553544 FAM162BQ5T6X4 162 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 COX8CQ7Z4L0 72 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 SMIM12Q96EX1 92 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 BIN3Q9NQY0 253 aa8.02□□□□□ -1.13
SRP54-203ENST00000553544 CIDEAO60543 219 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 NXPH4O95158 308 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 S100A4P26447 101 aaKnown RBP8.01□□□□□ -1.13
SRP54-203ENST00000553544 ALKAL2Q6UX46 152 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 OR4C5Q8NGB2 326 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 C11orf52Q96A22 123 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 PTH2Q96A98 100 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 C9orf85Q96MD7 179 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 VAX2Q9UIW0 290 aa8.01□□□□□ -1.13
SRP54-203ENST00000553544 IGKV3D-20A0A0C4DH25 116 aa8□□□□□ -1.13
SRP54-203ENST00000553544 SCO2A0A1W2PP80 73 aa8□□□□□ -1.13
SRP54-203ENST00000553544 ORM1P02763 201 aa8□□□□□ -1.13
SRP54-203ENST00000553544 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
SRP54-203ENST00000553544 GYPEP15421 78 aa8□□□□□ -1.13
SRP54-203ENST00000553544 ASIPP42127 132 aa8□□□□□ -1.13
SRP54-203ENST00000553544 RS1O15537 224 aa7.99□□□□□ -1.13
SRP54-203ENST00000553544 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
SRP54-203ENST00000553544 DNAH10OSP0CZ25 163 aa7.99□□□□□ -1.13
SRP54-203ENST00000553544 GATA1P15976 413 aaPredicted RBP7.99□□□□□ -1.13
SRP54-203ENST00000553544 NKX2-5P52952 324 aaPredicted RBP7.99□□□□□ -1.13
SRP54-203ENST00000553544 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
SRP54-203ENST00000553544 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
SRP54-203ENST00000553544 BAGE2Q86Y30 109 aa7.99□□□□□ -1.13
SRP54-203ENST00000553544 PGPEP1LA6NFU8 196 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 B4DEV8 164 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 C9JCJ5 164 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 K7EP13 123 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 SRIP30626 198 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 RPL35P42766 123 aaKnown RBP7.98□□□□□ -1.13
SRP54-203ENST00000553544 CRIP1P50238 77 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 ZNF674Q2M3X9 581 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 PIK3CD-AS1Q5SR53 167 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms