RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 M0R036 132 aa16.5■□□□□ 0.23
TDP1-205ENST00000553527 SPINK4O60575 86 aa16.5■□□□□ 0.23
TDP1-205ENST00000553527 BIN3Q9NQY0 253 aa16.5■□□□□ 0.23
TDP1-205ENST00000553527 B4DEV8 164 aa16.49■□□□□ 0.23
TDP1-205ENST00000553527 GNRH2O43555 120 aa16.49■□□□□ 0.23
TDP1-205ENST00000553527 IGKV3D-20A0A0C4DH25 116 aa16.48■□□□□ 0.23
TDP1-205ENST00000553527 IGHV3-16A0A0C4DH30 117 aa16.48■□□□□ 0.23
TDP1-205ENST00000553527 IGHV3-53P01767 116 aa16.48■□□□□ 0.23
TDP1-205ENST00000553527 LINC01559Q495D7 138 aa16.48■□□□□ 0.23
TDP1-205ENST00000553527 FAM74A3Q4VXF1 159 aa16.48■□□□□ 0.23
TDP1-205ENST00000553527 MUC4Q99102 2169 aa16.47■□□□□ 0.23
TDP1-205ENST00000553527 KRBOX1C9JBD0 128 aa16.47■□□□□ 0.23
TDP1-205ENST00000553527 OCC1Q8TAD7 63 aa16.47■□□□□ 0.23
TDP1-205ENST00000553527 DAZAP1Q96EP5 407 aaKnown RBP16.47■□□□□ 0.23
TDP1-205ENST00000553527 TMSB15BA0A087X1C1 80 aa16.46■□□□□ 0.23
TDP1-205ENST00000553527 K7EN84 100 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 ASIPP42127 132 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 CCL18P55774 89 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 LGALS9BQ3B8N2 356 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 SOHLH1Q5JUK2 328 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 LY96Q9Y6Y9 160 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 DNAH10Q8IVF4 4471 aa16.45■□□□□ 0.22
TDP1-205ENST00000553527 S100A4P26447 101 aaKnown RBP16.44■□□□□ 0.22
TDP1-205ENST00000553527 RPL19P84098 196 aaKnown RBP16.44■□□□□ 0.22
TDP1-205ENST00000553527 COMMD7Q86VX2 200 aa16.44■□□□□ 0.22
TDP1-205ENST00000553527 SPXQ9BT56 116 aa16.44■□□□□ 0.22
TDP1-205ENST00000553527 C19orf71A6NCJ1 209 aa16.43■□□□□ 0.22
TDP1-205ENST00000553527 P01737 135 aa16.43■□□□□ 0.22
TDP1-205ENST00000553527 SFTA3P0C7M3 94 aa16.43■□□□□ 0.22
TDP1-205ENST00000553527 C18orf15Q96N68 181 aa16.43■□□□□ 0.22
TDP1-205ENST00000553527 LINC00588Q9Y4M8 146 aa16.43■□□□□ 0.22
TDP1-205ENST00000553527 GRIFINA4D1Z8 144 aa16.42■□□□□ 0.22
TDP1-205ENST00000553527 TMEM241Q24JQ0 296 aa16.42■□□□□ 0.22
TDP1-205ENST00000553527 UQCC3Q6UW78 93 aa16.42■□□□□ 0.22
TDP1-205ENST00000553527 LINC01551Q86U37 167 aa16.42■□□□□ 0.22
TDP1-205ENST00000553527 NAT8Q9UHE5 227 aa16.42■□□□□ 0.22
TDP1-205ENST00000553527 H3BVH4 76 aa16.41■□□□□ 0.22
TDP1-205ENST00000553527 VSIG2Q96IQ7 327 aa16.41■□□□□ 0.22
TDP1-205ENST00000553527 C9orf85Q96MD7 179 aa16.41■□□□□ 0.22
TDP1-205ENST00000553527 LINC00862A6NCI5 91 aa16.4■□□□□ 0.22
TDP1-205ENST00000553527 RNASE3P12724 160 aaKnown RBP16.4■□□□□ 0.22
TDP1-205ENST00000553527 DNLZQ5SXM8 178 aa16.4■□□□□ 0.22
TDP1-205ENST00000553527 OR2D3Q8NGH3 330 aa16.4■□□□□ 0.22
TDP1-205ENST00000553527 RNASE7Q9H1E1 156 aaKnown RBP16.4■□□□□ 0.22
TDP1-205ENST00000553527 M0R2P5 195 aa16.39■□□□□ 0.21
TDP1-205ENST00000553527 CXCL1P09341 107 aa16.39■□□□□ 0.21
TDP1-205ENST00000553527 FAM3BP58499 235 aaPredicted RBP16.39■□□□□ 0.21
TDP1-205ENST00000553527 RPS20P60866 119 aaKnown RBP16.39■□□□□ 0.21
TDP1-205ENST00000553527 NUDT10Q8NFP7 164 aa16.39■□□□□ 0.21
TDP1-205ENST00000553527 NUDT11Q96G61 164 aa16.39■□□□□ 0.21
TDP1-205ENST00000553527 IL36BQ9NZH7 164 aa16.39■□□□□ 0.21
TDP1-205ENST00000553527 H3BNG1 76 aa16.38■□□□□ 0.21
TDP1-205ENST00000553527 PAX4O43316 350 aa16.38■□□□□ 0.21
TDP1-205ENST00000553527 ADIRFQ15847 76 aa16.38■□□□□ 0.21
TDP1-205ENST00000553527 ZNRF2Q8NHG8 242 aa16.38■□□□□ 0.21
TDP1-205ENST00000553527 TRGV4A0A0C4DH28 118 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 XKRY2A2RUG3 117 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 ARMS2P0C7Q2 107 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 ERVFC1-1P60608 527 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 RPL23P62829 140 aaKnown RBP16.37■□□□□ 0.21
TDP1-205ENST00000553527 ESRGQ1W209 222 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 Q6ZR54 194 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 RPP21Q9H633 154 aaKnown RBP16.37■□□□□ 0.21
TDP1-205ENST00000553527 HHLA3Q9XRX5 114 aa16.37■□□□□ 0.21
TDP1-205ENST00000553527 A0A096LPF7 62 aa16.36■□□□□ 0.21
TDP1-205ENST00000553527 FHL2Q14192 279 aa16.36■□□□□ 0.21
TDP1-205ENST00000553527 FAM231DQ6ZW35 169 aa16.36■□□□□ 0.21
TDP1-205ENST00000553527 ZNF575Q86XF7 245 aa16.36■□□□□ 0.21
TDP1-205ENST00000553527 RASL10AQ92737 203 aa16.36■□□□□ 0.21
TDP1-205ENST00000553527 ZNF479Q96JC4 524 aa16.36■□□□□ 0.21
TDP1-205ENST00000553527 RTL8CO15255 209 aa16.35■□□□□ 0.21
TDP1-205ENST00000553527 MED14OSP0DP75 135 aa16.35■□□□□ 0.21
TDP1-205ENST00000553527 PRO0255Q9UI72 69 aa16.35■□□□□ 0.21
TDP1-205ENST00000553527 BIRC6Q9NR09 4857 aa16.35■□□□□ 0.21
TDP1-205ENST00000553527 GATCO43716 136 aaKnown RBP16.34■□□□□ 0.21
TDP1-205ENST00000553527 GZMBP10144 247 aa16.34■□□□□ 0.21
TDP1-205ENST00000553527 CRYBA4P53673 196 aa16.34■□□□□ 0.21
TDP1-205ENST00000553527 ZNF876PQ49A33 203 aa16.34■□□□□ 0.21
TDP1-205ENST00000553527 LINC00336Q6ZUF6 198 aa16.34■□□□□ 0.21
TDP1-205ENST00000553527 ISOC2Q96AB3 205 aa16.34■□□□□ 0.21
TDP1-205ENST00000553527 PHLDA3Q9Y5J5 127 aa16.34■□□□□ 0.21
TDP1-205ENST00000553527 SLAQ13239 276 aa16.33■□□□□ 0.2
TDP1-205ENST00000553527 SYT8Q8NBV8 401 aa16.33■□□□□ 0.2
TDP1-205ENST00000553527 OR4C5Q8NGB2 326 aa16.33■□□□□ 0.2
TDP1-205ENST00000553527 Q9H8V8 135 aa16.33■□□□□ 0.2
TDP1-205ENST00000553527 NBDYA0A0U1RRE5 68 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 PRSS29PA6NIE9 313 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 C1orf134Q5TEV5 83 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 C15orf54Q8N8G6 183 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 PTH2Q96A98 100 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 TPPP3Q9BW30 176 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 SCRT2Q9NQ03 307 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 OSTCQ9NRP0 149 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 ICOSQ9Y6W8 199 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 DNAH2Q9P225 4427 aa16.32■□□□□ 0.2
TDP1-205ENST00000553527 TMEM218A2RU14 115 aa16.31■□□□□ 0.2
TDP1-205ENST00000553527 FER1L6-AS1Q8NA97 138 aa16.31■□□□□ 0.2
TDP1-205ENST00000553527 SFRP2Q96HF1 295 aa16.31■□□□□ 0.2
TDP1-205ENST00000553527 TRAV4A0A0B4J268 109 aa16.3■□□□□ 0.2
TDP1-205ENST00000553527 M0R381 172 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms