RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 DOCK9Q9BZ29 2069 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 TRAV12-1A0A0B4J245 112 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 IGLV1-47P01700 117 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 DAZAP2Q15038 168 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-208ENST00000553289 MAJINQ3KP22 176 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 C9orf66Q5T8R8 295 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 C5orf56Q8N8D9 126 aa8.97□□□□□ -0.97
SYNE2-208ENST00000553289 ANKRD29Q8N6D5 301 aa8.96□□□□□ -0.97
SYNE2-208ENST00000553289 C10orf105Q8TEF2 133 aa8.96□□□□□ -0.97
SYNE2-208ENST00000553289 CACNA1HO95180 2353 aa8.96□□□□□ -0.97
SYNE2-208ENST00000553289 SPRY4Q9C004 299 aa8.96□□□□□ -0.97
SYNE2-208ENST00000553289 ZFP2Q6ZN57 461 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 TRAV25A0A0B4J276 109 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 TEX22C9J3V5 150 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 PLXNB3Q9ULL4 1909 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-208ENST00000553289 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-208ENST00000553289 K7EQD1 137 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 ORMDL1Q9P0S3 153 aa8.96□□□□□ -0.98
SYNE2-208ENST00000553289 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
SYNE2-208ENST00000553289 KMT2EQ8IZD2 1858 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 DENND4CQ5VZ89 1909 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 NTN5Q8WTR8 489 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-208ENST00000553289 HIGD1BQ9P298 99 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 IGHV4-38-2P0DP08 117 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 CTRLP40313 264 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 RITA1Q96K30 269 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 H0YGX0 51 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-208ENST00000553289 ZMAT4Q9H898 229 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 GTF3C1Q12789 2109 aa8.95□□□□□ -0.98
SYNE2-208ENST00000553289 XCL1P47992 114 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 IGHV4-30-2A0A087WSY4 118 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 H3BQ85 93 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 FBXL19-AS1Q494R0 122 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 GPHB5Q86YW7 130 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 ODF3L1Q8IXM7 274 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 RPL39LQ96EH5 51 aaKnown RBP8.94□□□□□ -0.98
SYNE2-208ENST00000553289 EML6Q6ZMW3 1958 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 IGLV2-14P01704 120 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 AMTNQ6UX39 209 aa8.94□□□□□ -0.98
SYNE2-208ENST00000553289 MRPL23Q16540 153 aaKnown RBP8.93□□□□□ -0.98
SYNE2-208ENST00000553289 BAALC-AS2P0C853 105 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 SLURP1P55000 103 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 TIMM17AQ99595 171 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 IGLL5B9A064 214 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 C11orf1Q9H5F2 150 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 CREBBPQ92793 2442 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 A0A096LPF7 62 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 TRACP01848 142 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 GTSF1Q8WW33 167 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 CACNA1GO43497 2377 aa8.93□□□□□ -0.98
SYNE2-208ENST00000553289 ATP6V0E2Q8NHE4 81 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 ADORA2A-AS1P86434 159 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 SEM1Q6ZVN7 128 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 ATP5G1P05496 136 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 BLCAPP62952 87 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 ICOSQ9Y6W8 199 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 DEFB136Q30KP8 78 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
SYNE2-208ENST00000553289 SPART-AS1P0CW21 52 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 NBASA2RRP1 2371 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 IGHG2P01859 326 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 CLPSL2Q6UWE3 100 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 APRG1Q8IVJ8 170 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 IGKV2D-24A0A075B6R9 120 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 DOCK10Q96BY6 2186 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 CCL25O15444 150 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 NUPR1O60356 82 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 Q8N7P7 452 aa8.91□□□□□ -0.98
SYNE2-208ENST00000553289 IGKV1OR2-108A0A075B7D4 117 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 A0A0J9YY99 117 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 C2orf70A6NJV1 201 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 NCKAP5O14513 1909 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 LINC00574Q9H8X3 128 aa8.9□□□□□ -0.98
SYNE2-208ENST00000553289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.9□□□□□ -0.98
SYNE2-208ENST00000553289 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.99
SYNE2-208ENST00000553289 P0C879 139 aa8.9□□□□□ -0.99
SYNE2-208ENST00000553289 GYPEP15421 78 aa8.9□□□□□ -0.99
SYNE2-208ENST00000553289 SIRPDQ9H106 197 aa8.9□□□□□ -0.99
SYNE2-208ENST00000553289 E9PLD3 99 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 COX7A2LO14548 114 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 CGB3P0DN86 165 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 CRYBA4P53673 196 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 Q8N1Y9 231 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 ZNF503Q96F45 646 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 IGHV4OR15-8A0A075B7B6 117 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 A0A087WW49 117 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 C19orf71A6NCJ1 209 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms