RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	IER3IP1	Q9Y5U9	82 aa		4.78	□□□□□ -1.64
PFKM-231	ENST00000553055	ICOS	Q9Y6W8	199 aa		4.78	□□□□□ -1.64
PFKM-231	ENST00000553055	SCN3A	Q9NY46	2000 aa		4.78	□□□□□ -1.64
PFKM-231	ENST00000553055		H3BMM0	161 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	SNRNP200	O75643	2136 aa	Known RBP	4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	OR2H2	O95918	312 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	MUC1	P15941	1255 aa	Predicted RBP	4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	RPL18	Q07020	188 aa	Known RBP	4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	LINC01590	Q5TEZ4	76 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055		Q5W150	140 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	HRCT1	Q6UXD1	115 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	PRR15	Q8IV56	129 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	OR4E2	Q8NGC2	313 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	TMEM106A	Q96A25	262 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	UBE2W	Q96B02	151 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	SLAMF6	Q96DU3	332 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	ADAT1	Q9BUB4	502 aa	Known RBP	4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	SMDT1	Q9H4I9	107 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	CYTL1	Q9NRR1	136 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	TP73-AS1	Q9UF72	201 aa		4.77	□□□□□ -1.65
PFKM-231	ENST00000553055	WNK1	Q9H4A3	2382 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	LOC102725191	A0A1B0GVB3	256 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	FABP5P3	A8MUU1	101 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055		A8MWP6	167 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055		M0R2Z0	102 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	ZNF861P	O60384	105 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	GGCT	O75223	188 aa	Known RBP	4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	CDS2	O95674	445 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	SRP14	P37108	136 aa	Known RBP	4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	KLF3	P57682	345 aa	Predicted RBP	4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	TAS2R30	P59541	319 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	DEFB113	Q30KQ7	82 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	C1orf140	Q5VVS0	124 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	OR4K15	Q8NH41	348 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	AQP3	Q92482	292 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055		Q96M85	177 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	RPS10P5	Q9NQ39	176 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	CACFD1	Q9UGQ2	172 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	ZNF835	Q9Y2P0	537 aa		4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	RBM7	Q9Y580	266 aa	Known RBP	4.76	□□□□□ -1.65
PFKM-231	ENST00000553055	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	MEIS3P1	A6NDR6	274 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	C17orf51	A8MQB3	221 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	LECT2	O14960	151 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	LEPROT	O15243	131 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	DPM2	O94777	84 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	SFT2D2	O95562	160 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	RBP2	P50120	134 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	NDUFA6	P56556	154 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	RBM11	P57052	281 aa	Known RBP	4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	MEF2B	Q02080	365 aa	Predicted RBP	4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	ZNF141	Q15928	474 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	GFI1B	Q5VTD9	330 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	LCN9	Q8WX39	176 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	CARD19	Q96LW7	228 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	GGACT	Q9BVM4	153 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	CST11	Q9H112	138 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	TAF9B	Q9HBM6	251 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	MPDZ	O75970	2070 aa		4.75	□□□□□ -1.65
PFKM-231	ENST00000553055	RYR3	Q15413	4870 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	DSCAM	O60469	2012 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	TRPM6	Q9BX84	2022 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055		A0A1B0GW64	132 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	C7orf77	A4D0Y5	90 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055		H7BYZ3	331 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	LYZL6	O75951	148 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	IGHV1-69	P01742	117 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	CCL3	P10147	92 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	PKIA	P61925	76 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	HIST1H1A	Q02539	215 aa	Predicted RBP	4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	ADM2	Q7Z4H4	148 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	RPRML	Q8N4K4	120 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	SMIM3	Q9BZL3	60 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	GFRA4	Q9GZZ7	299 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	CNTRL	Q7Z7A1	2325 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	SVEP1	Q4LDE5	3571 aa		4.74	□□□□□ -1.65
PFKM-231	ENST00000553055	AGRN	O00468	2067 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	IGLV4-69	A0A075B6H9	119 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055		A0A087WWC5	75 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055		A0A0B4J2C4	111 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	TMEM235	A6NFC5	223 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	ZNF860	A6NHJ4	632 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	UMAD1	C9J7I0	102 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	BUB1B-PAK6	H3BSN5	160 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	IGLV7-43	P04211	117 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	IL4	P05112	153 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	HIST1H1B	P16401	226 aa	Known RBP	4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	LGALS3	P17931	250 aa	Known RBP	4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	FKBP2	P26885	142 aa	Known RBP	4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	SNCA	P37840	140 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	BIK	Q13323	160 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	MRGPRG-AS1	Q2M3A8	158 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055		Q6ZQT7	251 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055		Q6ZR54	194 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	CNEP1R1	Q8N9A8	125 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	OTOS	Q8NHW6	89 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	YPEL2	Q96QA6	119 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	UPK3B	Q9BT76	320 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055	TAS2R4	Q9NYW5	299 aa		4.73	□□□□□ -1.65
PFKM-231	ENST00000553055		U3KQK5	164 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms