RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 PRADC1Q9BSG0 188 aa7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 APLNQ9ULZ1 77 aa7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 HHLA3Q9XRX5 114 aa7.25□□□□□ -1.25
TRAFD1-208ENST00000552890 DNAH7Q8WXX0 4024 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 IGKV3D-20A0A0C4DH25 116 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 LY6G6CO95867 125 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 OR5AL1P0C617 328 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 TOR2AQ5JU69 321 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 PRR27Q6MZM9 219 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 SMIM7Q9BQ49 75 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 MRPL16Q9NX20 251 aaKnown RBP7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 ICOSQ9Y6W8 199 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 MUC4Q99102 2169 aa7.24□□□□□ -1.25
TRAFD1-208ENST00000552890 TRAV26-1A0A087WT03 109 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 M0R036 132 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 NUDT3O95989 172 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 SMIM17P0DL12 118 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 CRIP1P50238 77 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 CACNG7P62955 275 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 WDR73Q6P4I2 378 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 POM121L12Q8N7R1 296 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 PARLQ9H300 379 aa7.23□□□□□ -1.25
TRAFD1-208ENST00000552890 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 RAB19A4D1S5 217 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 ZNF727A8MUV8 499 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 A8MWL6 223 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 K7EP13 123 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 RS1O15537 224 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 ARMS2P0C7Q2 107 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 RNASE3P12724 160 aaKnown RBP7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 RHOHQ15669 191 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 CT83Q5H943 113 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 FAM231DQ6ZW35 169 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 C15orf54Q8N8G6 183 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 DERL1Q9BUN8 251 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 CSMD3Q7Z407 3707 aa7.22□□□□□ -1.25
TRAFD1-208ENST00000552890 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 H3BVH4 76 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 BTF3P20290 206 aaKnown RBP7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 SRIP30626 198 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 CEBPGP53567 150 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 CRYBA4P53673 196 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 TMEM241Q24JQ0 296 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 SOHLH1Q5JUK2 328 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 Q6ZQT7 251 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 SMIM15Q7Z3B0 74 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 NEGR1Q7Z3B1 354 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 NHLRC2Q8NBF2 726 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 BORCS7Q96B45 105 aa7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
TRAFD1-208ENST00000552890 C19orf71A6NCJ1 209 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 H7C1H1 209 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 SNAI2O43623 268 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 TRGC1P0CF51 173 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 FHL2Q14192 279 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 FER1L6-AS1Q8NA97 138 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 RPP21Q9H633 154 aaKnown RBP7.2□□□□□ -1.26
TRAFD1-208ENST00000552890 TRAV9-2A0A087WT02 112 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 TMSB15BA0A087X1C1 80 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 TRBV10-1A0A0K0K1A3 114 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 M0R381 172 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 GATCO43716 136 aaKnown RBP7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 IGLV2-8P01709 118 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 SRP19P09132 144 aaKnown RBP7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 GATA1P15976 413 aaPredicted RBP7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 HOXA5P20719 270 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 TIRAPP58753 221 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 CLLU1Q5K131 121 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 OCC1Q8TAD7 63 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 SFRP2Q96HF1 295 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 GFRA4Q9GZZ7 299 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 NAT8Q9UHE5 227 aa7.19□□□□□ -1.26
TRAFD1-208ENST00000552890 TRBV20OR9-2A0A075B6H5 130 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 A0A087WWC5 75 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 A0A0J9YY99 117 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 GRIFINA4D1Z8 144 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 NXPH4O95158 308 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 IGHV3-53P01767 116 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 RAB4BP61018 213 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 PNRC1Q12796 327 aaPredicted RBP7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 NUDT10Q8NFP7 164 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 FRZBQ92765 325 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 NUDT11Q96G61 164 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 ZNF479Q96JC4 524 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 OSTCQ9NRP0 149 aa7.18□□□□□ -1.26
TRAFD1-208ENST00000552890 PPP1R2P9O14990 202 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms