RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 GNG4P50150 75 aa12.11□□□□□ -0.47
CDK4-208ENST00000551706 OR4C5Q8NGB2 326 aa12.11□□□□□ -0.47
CDK4-208ENST00000551706 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
CDK4-208ENST00000551706 TRGV4A0A0C4DH28 118 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 A0A0J9YY99 117 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 C9JCJ5 164 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 TMEM250H0YL14 139 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 RNF212Q495C1 297 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 ZNF506Q5JVG8 444 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 PIK3CD-AS1Q5SR53 167 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
CDK4-208ENST00000551706 VPS13DQ5THJ4 4388 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 CIDEAO60543 219 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 NDUFS6O75380 124 aaKnown RBP12.09□□□□□ -0.47
CDK4-208ENST00000551706 FHL2Q14192 279 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 PRR27Q6MZM9 219 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 HHLA3Q9XRX5 114 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 MUC4Q99102 2169 aa12.09□□□□□ -0.47
CDK4-208ENST00000551706 PKHD1P08F94 4074 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 RAB19A4D1S5 217 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 H3BVH4 76 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 PAX4O43316 350 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 CXCL1P09341 107 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 SFTA3P0C7M3 94 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 MGST1P10620 155 aaKnown RBP12.08□□□□□ -0.48
CDK4-208ENST00000551706 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
CDK4-208ENST00000551706 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
CDK4-208ENST00000551706 EIF5A2Q9GZV4 153 aaKnown RBP12.08□□□□□ -0.48
CDK4-208ENST00000551706 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 PGPEP1LA6NFU8 196 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 IGLV2-8P01709 118 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 CRYBA4P53673 196 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 CCL18P55774 89 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 TOR2AQ5JU69 321 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 DAZAP1Q96EP5 407 aaKnown RBP12.07□□□□□ -0.48
CDK4-208ENST00000551706 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
CDK4-208ENST00000551706 A8MWV9 139 aa12.06□□□□□ -0.48
CDK4-208ENST00000551706 RS1O15537 224 aa12.06□□□□□ -0.48
CDK4-208ENST00000551706 PHLDA3Q9Y5J5 127 aa12.06□□□□□ -0.48
CDK4-208ENST00000551706 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
CDK4-208ENST00000551706 CFAP126Q5VTH2 177 aa12.05□□□□□ -0.48
CDK4-208ENST00000551706 ZNF575Q86XF7 245 aa12.05□□□□□ -0.48
CDK4-208ENST00000551706 SCRT2Q9NQ03 307 aa12.05□□□□□ -0.48
CDK4-208ENST00000551706 ICOSQ9Y6W8 199 aa12.05□□□□□ -0.48
CDK4-208ENST00000551706 RPL19P84098 196 aaKnown RBP12.04□□□□□ -0.48
CDK4-208ENST00000551706 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
CDK4-208ENST00000551706 PARLQ9H300 379 aa12.04□□□□□ -0.48
CDK4-208ENST00000551706 A0A096LPF7 62 aa12.03□□□□□ -0.48
CDK4-208ENST00000551706 RPS20P60866 119 aaKnown RBP12.03□□□□□ -0.48
CDK4-208ENST00000551706 MRPL23Q16540 153 aaKnown RBP12.03□□□□□ -0.48
CDK4-208ENST00000551706 ZFP82Q8N141 532 aa12.03□□□□□ -0.48
CDK4-208ENST00000551706 DNAH6Q9C0G6 4158 aa12.02□□□□□ -0.48
CDK4-208ENST00000551706 XKRY2A2RUG3 117 aa12.02□□□□□ -0.49
CDK4-208ENST00000551706 C19orf71A6NCJ1 209 aa12.02□□□□□ -0.49
CDK4-208ENST00000551706 P01737 135 aa12.02□□□□□ -0.49
CDK4-208ENST00000551706 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
CDK4-208ENST00000551706 NDUFA5Q16718 116 aa12.02□□□□□ -0.49
CDK4-208ENST00000551706 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
CDK4-208ENST00000551706 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.49
CDK4-208ENST00000551706 OR5AL1P0C617 328 aa12.01□□□□□ -0.49
CDK4-208ENST00000551706 CEBPGP53567 150 aa12.01□□□□□ -0.49
CDK4-208ENST00000551706 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
CDK4-208ENST00000551706 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
CDK4-208ENST00000551706 KRTAP4-5Q9BYR2 181 aa12.01□□□□□ -0.49
CDK4-208ENST00000551706 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
CDK4-208ENST00000551706 M0R381 172 aa12□□□□□ -0.49
CDK4-208ENST00000551706 RHODO00212 210 aa12□□□□□ -0.49
CDK4-208ENST00000551706 SNAI2O43623 268 aa12□□□□□ -0.49
CDK4-208ENST00000551706 GYPEP15421 78 aa12□□□□□ -0.49
CDK4-208ENST00000551706 SRIP30626 198 aa12□□□□□ -0.49
CDK4-208ENST00000551706 OCC1Q8TAD7 63 aa12□□□□□ -0.49
CDK4-208ENST00000551706 PRADC1Q9BSG0 188 aa12□□□□□ -0.49
CDK4-208ENST00000551706 SMDT1Q9H4I9 107 aa12□□□□□ -0.49
CDK4-208ENST00000551706 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
CDK4-208ENST00000551706 LY96Q9Y6Y9 160 aa12□□□□□ -0.49
CDK4-208ENST00000551706 FAT2Q9NYQ8 4349 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 K7EQD1 137 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 SRP19P09132 144 aaKnown RBP11.99□□□□□ -0.49
CDK4-208ENST00000551706 RHOHQ15669 191 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 ESRGQ1W209 222 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 SFRP2Q96HF1 295 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 SMIM7Q9BQ49 75 aa11.99□□□□□ -0.49
CDK4-208ENST00000551706 IGHV3-73A0A0B4J1V6 119 aa11.98□□□□□ -0.49
CDK4-208ENST00000551706 NXPH4O95158 308 aa11.98□□□□□ -0.49
CDK4-208ENST00000551706 PEA15Q15121 130 aa11.98□□□□□ -0.49
CDK4-208ENST00000551706 LINC00336Q6ZUF6 198 aa11.98□□□□□ -0.49
CDK4-208ENST00000551706 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
CDK4-208ENST00000551706 UPK3BQ9BT76 320 aa11.98□□□□□ -0.49
CDK4-208ENST00000551706 MRPS16Q9Y3D3 137 aaKnown RBP11.98□□□□□ -0.49
CDK4-208ENST00000551706 DNAH2Q9P225 4427 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms