RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
VPS29-209ENST00000551655 BCL7BQ9BQE9 202 aa8.99□□□□□ -0.97
VPS29-209ENST00000551655 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
VPS29-209ENST00000551655 FAM24AA6NFZ4 105 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 SLPIP03973 132 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 FGF7P21781 194 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 BCAP31P51572 246 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 MPV17L2Q567V2 206 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 KCNIP4Q6PIL6 250 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 CLPSL2Q6UWE3 100 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 LYPD6BQ8NI32 183 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 HYLS1Q96M11 299 aa8.98□□□□□ -0.97
VPS29-209ENST00000551655 IGHV3-64A0A075B6Q5 118 aa8.97□□□□□ -0.97
VPS29-209ENST00000551655 ANGP03950 147 aaKnown RBP8.97□□□□□ -0.97
VPS29-209ENST00000551655 ZNF80P51504 273 aaPredicted RBP8.97□□□□□ -0.97
VPS29-209ENST00000551655 KRTAP4-8Q9BYQ9 185 aa8.97□□□□□ -0.97
VPS29-209ENST00000551655 L7N2F9 121 aa8.96□□□□□ -0.98
VPS29-209ENST00000551655 RNASE3P12724 160 aaKnown RBP8.96□□□□□ -0.98
VPS29-209ENST00000551655 FAUP35544 74 aaKnown RBP8.96□□□□□ -0.98
VPS29-209ENST00000551655 FGF8P55075 233 aaPredicted RBP8.96□□□□□ -0.98
VPS29-209ENST00000551655 CNBPP62633 177 aaKnown RBP8.96□□□□□ -0.98
VPS29-209ENST00000551655 VAMP2P63027 116 aa8.96□□□□□ -0.98
VPS29-209ENST00000551655 UFSP1Q6NVU6 142 aa8.96□□□□□ -0.98
VPS29-209ENST00000551655 OR2G3Q8NGZ4 309 aa8.96□□□□□ -0.98
VPS29-209ENST00000551655 TRIM63Q969Q1 353 aa8.96□□□□□ -0.98
VPS29-209ENST00000551655 SLC25A21Q9BQT8 299 aaPredicted RBP8.96□□□□□ -0.98
VPS29-209ENST00000551655 TREM1Q9NP99 234 aa8.96□□□□□ -0.98
VPS29-209ENST00000551655 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
VPS29-209ENST00000551655 LGALSLQ3ZCW2 172 aaPredicted RBP8.95□□□□□ -0.98
VPS29-209ENST00000551655 ZFP2Q6ZN57 461 aa8.95□□□□□ -0.98
VPS29-209ENST00000551655 TMED6Q8WW62 240 aa8.95□□□□□ -0.98
VPS29-209ENST00000551655 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
VPS29-209ENST00000551655 RSL24D1Q9UHA3 163 aaKnown RBP8.95□□□□□ -0.98
VPS29-209ENST00000551655 LSM5Q9Y4Y9 91 aaKnown RBP8.95□□□□□ -0.98
VPS29-209ENST00000551655 A0A087WWL8 130 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 OR7C2O60412 319 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 EIF3GO75821 320 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS29-209ENST00000551655 ATP6V1G2O95670 118 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 SRSF9Q13242 221 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS29-209ENST00000551655 SPCS2Q15005 226 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 GOLT1AQ6ZVE7 132 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 OR10G7Q8NGN6 311 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 PTH2Q96A98 100 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 NPCDR1Q9BY65 106 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 FLVCR2Q9UPI3 526 aa8.94□□□□□ -0.98
VPS29-209ENST00000551655 IGSF23A1L1A6 192 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 H7C1H1 209 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 CCSO14618 274 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 UBE2L3P68036 154 aaKnown RBP8.93□□□□□ -0.98
VPS29-209ENST00000551655 MAJINQ3KP22 176 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 TOMM5Q8N4H5 51 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 CHAC2Q8WUX2 184 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 NMES1Q9C002 83 aa8.93□□□□□ -0.98
VPS29-209ENST00000551655 RABL2AQ9UBK7 228 aaPredicted RBP8.93□□□□□ -0.98
VPS29-209ENST00000551655 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 A8MWV9 139 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 GNG5P63218 68 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 MIAQ16674 131 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 THAP6Q8TBB0 222 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 C11orf1Q9H5F2 150 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 VAX2Q9UIW0 290 aa8.92□□□□□ -0.98
VPS29-209ENST00000551655 IGLV10-54A0A075B6I4 117 aa8.91□□□□□ -0.98
VPS29-209ENST00000551655 COX6A2Q02221 97 aa8.91□□□□□ -0.98
VPS29-209ENST00000551655 SPANXN2Q5MJ10 180 aa8.91□□□□□ -0.98
VPS29-209ENST00000551655 FAM74A4Q5TZK3 123 aa8.91□□□□□ -0.98
VPS29-209ENST00000551655 CLRN3Q8NCR9 226 aa8.91□□□□□ -0.98
VPS29-209ENST00000551655 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
VPS29-209ENST00000551655 TAAR5O14804 337 aa8.9□□□□□ -0.98
VPS29-209ENST00000551655 TCRBP04435 133 aa8.9□□□□□ -0.98
VPS29-209ENST00000551655 STPG4Q8N801 248 aa8.9□□□□□ -0.98
VPS29-209ENST00000551655 SULT1A1P50225 295 aa8.89□□□□□ -0.99
VPS29-209ENST00000551655 UBE2D3P61077 147 aa8.89□□□□□ -0.99
VPS29-209ENST00000551655 UBE2D2P62837 147 aa8.89□□□□□ -0.99
VPS29-209ENST00000551655 LINC00269Q8N2A0 174 aa8.89□□□□□ -0.99
VPS29-209ENST00000551655 PRSS3P2Q8NHM4 247 aa8.89□□□□□ -0.99
VPS29-209ENST00000551655 SLIRPQ9GZT3 109 aaKnown RBP8.89□□□□□ -0.99
VPS29-209ENST00000551655 TRBV6-8A0A0A6YYG3 113 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.88□□□□□ -0.99
VPS29-209ENST00000551655 GCGP01275 180 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 SMIM18P0DKX4 95 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 S100A11P31949 105 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 AP3S2P59780 193 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 PRR4Q16378 134 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 TMEM252Q8N6L7 170 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 CMTM2Q8TAZ6 248 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 AP5S1Q9NUS5 200 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
VPS29-209ENST00000551655 PTTG1O95997 202 aa8.87□□□□□ -0.99
VPS29-209ENST00000551655 PYDC2Q56P42 97 aa8.87□□□□□ -0.99
VPS29-209ENST00000551655 CHCHD5Q9BSY4 110 aa8.87□□□□□ -0.99
VPS29-209ENST00000551655 FAM231BA6NCW3 169 aa8.86□□□□□ -0.99
VPS29-209ENST00000551655 LYRM2Q9NU23 88 aaPredicted RBP8.86□□□□□ -0.99
VPS29-209ENST00000551655 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 FAM25EA8MYX2 175 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 S100A4P26447 101 aaKnown RBP8.85□□□□□ -0.99
VPS29-209ENST00000551655 RAB5CP51148 216 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms