RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SNCAP37840 140 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 ARPC4P59998 168 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 B2MP61769 119 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 NCS1P62166 190 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 ERCC8Q13216 396 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 TDRG1Q3Y452 100 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 TTC32Q5I0X7 151 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 UBE2NLQ5JXB2 153 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 IBA57Q5T440 356 aaKnown RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 GPR107Q5VW38 600 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 SDIM1Q6ZPB5 146 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 MRPL55Q7Z7F7 128 aaKnown RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 TMED4Q7Z7H5 227 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 Q8N976 141 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 Q8N9L7 120 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 OR4B1Q8NGF8 309 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 OR4C16Q8NGL9 310 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 OR5H2Q8NGV7 314 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 SMIM4Q8WVI0 70 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 FRZBQ92765 325 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 BORCS5Q969J3 196 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 GNPNAT1Q96EK6 184 aaPredicted RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 LINC00052Q96N35 136 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 SDHCQ99643 169 aaPredicted RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 CHAC1Q9BUX1 264 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 MRPL32Q9BYC8 188 aaKnown RBP1.44□□□□□ -2.18
CPSF6-207ENST00000551516 NAA60Q9H7X0 242 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 DIABLOQ9NR28 239 aa1.44□□□□□ -2.18
CPSF6-207ENST00000551516 IGLV4-69A0A075B6H9 119 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 TRBV19A0A075B6N1 114 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 A0A096LNJ9 63 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 TRAV5A0A0B4J249 113 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 ERICH4A6NGS2 130 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 GABARAPH6UMI1 98 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 L7N2F9 121 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 M0R3E3 92 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 HPGDSO60760 199 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 IGLV2-8P01709 118 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 NMBP08949 121 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 CXCL2P19875 107 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 SSBP1Q04837 148 aaKnown RBP1.43□□□□□ -2.18
CPSF6-207ENST00000551516 OR2F1Q13607 317 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 SMCO1Q147U7 214 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 ZNF726P1Q15940 193 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 DEFB116Q30KQ4 102 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 ORMDL2Q53FV1 153 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 Q6AWC8 147 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 IZUMO2Q6UXV1 221 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 KRTAP11-1Q8IUC1 163 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 UBE2DNLQ8IWF7 75 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 LGI3Q8N145 548 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 DTD1Q8TEA8 209 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 S100A16Q96FQ6 103 aaKnown RBP1.43□□□□□ -2.18
CPSF6-207ENST00000551516 ACY3Q96HD9 319 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 LINC01600Q96MT4 127 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 LINC00167Q96N53 147 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 LINC01587Q99440 93 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 SLIRPQ9GZT3 109 aaKnown RBP1.43□□□□□ -2.18
CPSF6-207ENST00000551516 RPRMQ9NS64 109 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 SSR3Q9UNL2 185 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 PSG8Q9UQ74 426 aa1.43□□□□□ -2.18
CPSF6-207ENST00000551516 RCL1Q9Y2P8 373 aaKnown RBP1.43□□□□□ -2.18
CPSF6-207ENST00000551516 IGLV1-50A0A075B6I6 118 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 DUXBA0A1W2PPF3 345 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 HSBP1O75506 76 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 MED6O75586 246 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 CFDP00746 253 aaPredicted RBP1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SFTA3P0C7M3 94 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SULT1A3P0DMM9 295 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SULT1A4P0DMN0 295 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 ZNF138P52744 262 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 UBE2MP61081 183 aaKnown RBP1.42□□□□□ -2.18
CPSF6-207ENST00000551516 VBP1P61758 197 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 RAB11AP62491 216 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 BTN1A1Q13410 526 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SPCS2Q15005 226 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 KRTAP19-2Q3LHN2 52 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 EBLN2Q6P2I7 272 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 CYP2G1PQ6ZSU1 146 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 NEGR1Q7Z3B1 354 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SNX29P2Q8IUI4 249 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 OR8I2Q8N0Y5 310 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 INO80EQ8NBZ0 244 aaPredicted RBP1.42□□□□□ -2.18
CPSF6-207ENST00000551516 ZFAND1Q8TCF1 268 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 DYNC2LI1Q8TCX1 351 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 PTH2Q96A98 100 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 SMIM8Q96KF7 97 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 CNBD2Q96M20 576 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 GPR82Q96P67 336 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 MGST2Q99735 147 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 NDFIP1Q9BT67 221 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 CCDC90BQ9GZT6 254 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 VCXQ9H320 206 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 MCUBQ9NWR8 336 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM14CQ9P0S9 112 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 ZNF492Q9P255 531 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 PRO0255Q9UI72 69 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 HHLA3Q9XRX5 114 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 FUT9Q9Y231 359 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms