RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 UBE2WQ96B02 151 aa7.21□□□□□ -1.26
PFDN5-212ENST00000550880 C9orf85Q96MD7 179 aa7.21□□□□□ -1.26
PFDN5-212ENST00000550880 SEC22CQ9BRL7 303 aa7.21□□□□□ -1.26
PFDN5-212ENST00000550880 K7EQM0 130 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 TCRBP04435 133 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 IL15RAQ13261 267 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 LGALSLQ3ZCW2 172 aaPredicted RBP7.2□□□□□ -1.26
PFDN5-212ENST00000550880 ZFP69Q49AA0 526 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 NIT1Q86X76 327 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 OR2T35Q8NGX2 323 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
PFDN5-212ENST00000550880 TVP23CQ96ET8 276 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 CHCHD7Q9BUK0 85 aa7.2□□□□□ -1.26
PFDN5-212ENST00000550880 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 LYRM1O43325 122 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 IL7P13232 177 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 S100A4P26447 101 aaKnown RBP7.19□□□□□ -1.26
PFDN5-212ENST00000550880 PIK3CD-AS1Q5SR53 167 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 Q6ZRU5 148 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 SCGB1C1Q8TD33 95 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 C1orf43Q9BWL3 253 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 PARLQ9H300 379 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 NUDT15Q9NV35 164 aa7.19□□□□□ -1.26
PFDN5-212ENST00000550880 A0A0D9SG52 128 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 A0A1W2PPV4 95 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 GCGP01275 180 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 LINC00694P0DN24 101 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
PFDN5-212ENST00000550880 DMRTA1Q5VZB9 504 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 PQLC2Q6ZP29 291 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 HSD17B11Q8NBQ5 300 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 SDHCQ99643 169 aaPredicted RBP7.18□□□□□ -1.26
PFDN5-212ENST00000550880 SAMD10Q9BYL1 202 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 DPH3P1Q9H4G8 78 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 OR5AC2Q9NZP5 309 aa7.18□□□□□ -1.26
PFDN5-212ENST00000550880 CRPP02741 224 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 H2AFB2P0C5Z0 115 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 RNASE3P12724 160 aaKnown RBP7.17□□□□□ -1.26
PFDN5-212ENST00000550880 GNG5P63218 68 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 SMUG1Q53HV7 270 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 DGAT2L7PQ6IED9 249 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 ATRAIDQ6UW56 229 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 OR2G3Q8NGZ4 309 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 ZC2HC1AQ96GY0 325 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 DNAJC30Q96LL9 226 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 SGK494Q96LW2 274 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
PFDN5-212ENST00000550880 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
PFDN5-212ENST00000550880 RHODO00212 210 aa7.16□□□□□ -1.26
PFDN5-212ENST00000550880 PLA2G10O15496 165 aa7.16□□□□□ -1.26
PFDN5-212ENST00000550880 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
PFDN5-212ENST00000550880 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
PFDN5-212ENST00000550880 LRRC37A5PQ49AS3 106 aa7.16□□□□□ -1.26
PFDN5-212ENST00000550880 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
PFDN5-212ENST00000550880 ASIPP42127 132 aa7.15□□□□□ -1.26
PFDN5-212ENST00000550880 CYCSP99999 105 aaKnown RBP7.15□□□□□ -1.26
PFDN5-212ENST00000550880 SAPCD1Q5SSQ6 148 aa7.15□□□□□ -1.26
PFDN5-212ENST00000550880 C14orf178Q8N769 122 aaPredicted RBP7.15□□□□□ -1.26
PFDN5-212ENST00000550880 TMEM75Q8N9X5 138 aa7.15□□□□□ -1.26
PFDN5-212ENST00000550880 PSG8Q9UQ74 426 aa7.15□□□□□ -1.26
PFDN5-212ENST00000550880 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
PFDN5-212ENST00000550880 EIF3GO75821 320 aaKnown RBP eCLIP7.14□□□□□ -1.27
PFDN5-212ENST00000550880 TCRAP04437 139 aa7.14□□□□□ -1.27
PFDN5-212ENST00000550880 PRNTQ86SH4 94 aa7.14□□□□□ -1.27
PFDN5-212ENST00000550880 C5orf17Q8NAS9 161 aa7.14□□□□□ -1.27
PFDN5-212ENST00000550880 DPH3Q96FX2 82 aa7.14□□□□□ -1.27
PFDN5-212ENST00000550880 Q9UF83 564 aa7.14□□□□□ -1.27
PFDN5-212ENST00000550880 FAM240BA0A1B0GVZ2 78 aa7.13□□□□□ -1.27
PFDN5-212ENST00000550880 HLA-DQA1P01909 254 aa7.13□□□□□ -1.27
PFDN5-212ENST00000550880 RPL36AP83881 106 aaKnown RBP7.13□□□□□ -1.27
PFDN5-212ENST00000550880 RPL19P84098 196 aaKnown RBP7.13□□□□□ -1.27
PFDN5-212ENST00000550880 FLI1Q01543 452 aaPredicted RBP7.13□□□□□ -1.27
PFDN5-212ENST00000550880 FAM74A4Q5TZK3 123 aa7.13□□□□□ -1.27
PFDN5-212ENST00000550880 C15orf54Q8N8G6 183 aa7.13□□□□□ -1.27
PFDN5-212ENST00000550880 C9orf163Q8N9P6 203 aa7.13□□□□□ -1.27
PFDN5-212ENST00000550880 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.13□□□□□ -1.27
PFDN5-212ENST00000550880 OR10G7Q8NGN6 311 aa7.13□□□□□ -1.27
PFDN5-212ENST00000550880 RPL36ALQ969Q0 106 aaKnown RBP7.13□□□□□ -1.27
PFDN5-212ENST00000550880 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 SIX6O95475 246 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 ANGP03950 147 aaKnown RBP7.12□□□□□ -1.27
PFDN5-212ENST00000550880 PKIAP61925 76 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 UFSP1Q6NVU6 142 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 ENHOQ6UWT2 76 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 OR11H4Q8NGC9 324 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 SMIM3Q9BZL3 60 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 JPT2Q9H910 190 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 IL36BQ9NZH7 164 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 HSPB11Q9Y547 144 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
PFDN5-212ENST00000550880 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
PFDN5-212ENST00000550880 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 IGKV3D-20A0A0C4DH25 116 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 H0YIZ8 118 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
PFDN5-212ENST00000550880 PRSS1P07477 247 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 PET100P0DJ07 73 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 ARL14EPLP0DKL9 152 aa7.11□□□□□ -1.27
PFDN5-212ENST00000550880 MIAQ16674 131 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms