RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 PTPRMP28827 1452 aa2.72□□□□□ -1.97
PRIM1-204ENST00000549549 NBDYA0A0U1RRE5 68 aa2.72□□□□□ -1.97
PRIM1-204ENST00000549549 RRAS2P62070 204 aaPredicted RBP2.72□□□□□ -1.97
PRIM1-204ENST00000549549 LINC01545Q5VT33 79 aa2.72□□□□□ -1.97
PRIM1-204ENST00000549549 CCDC167Q9P0B6 97 aa2.72□□□□□ -1.97
PRIM1-204ENST00000549549 GNG7O60262 68 aa2.71□□□□□ -1.98
PRIM1-204ENST00000549549 PRB4P10163 310 aaPredicted RBP2.71□□□□□ -1.98
PRIM1-204ENST00000549549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.7□□□□□ -1.98
PRIM1-204ENST00000549549 CCDC179H3BU77 68 aa2.7□□□□□ -1.98
PRIM1-204ENST00000549549 SLC25A6P12236 298 aa2.7□□□□□ -1.98
PRIM1-204ENST00000549549 RPL13AP3Q6NVV1 102 aa2.7□□□□□ -1.98
PRIM1-204ENST00000549549 PLXNA2O75051 1894 aa2.69□□□□□ -1.98
PRIM1-204ENST00000549549 CCL19Q99731 98 aa2.69□□□□□ -1.98
PRIM1-204ENST00000549549 PSMG3Q9BT73 122 aaPredicted RBP2.69□□□□□ -1.98
PRIM1-204ENST00000549549 MYH13Q9UKX3 1938 aa2.68□□□□□ -1.98
PRIM1-204ENST00000549549 LOC101927531A0A1B0GV80 90 aa2.68□□□□□ -1.98
PRIM1-204ENST00000549549 CCKP06307 115 aa2.68□□□□□ -1.98
PRIM1-204ENST00000549549 FXYD3Q14802 87 aa2.68□□□□□ -1.98
PRIM1-204ENST00000549549 NDUFA11Q86Y39 141 aa2.68□□□□□ -1.98
PRIM1-204ENST00000549549 IBTKQ9P2D0 1353 aaPredicted RBP2.68□□□□□ -1.98
PRIM1-204ENST00000549549 DPH3Q96FX2 82 aa2.67□□□□□ -1.98
PRIM1-204ENST00000549549 PHLPP1O60346 1717 aa2.67□□□□□ -1.98
PRIM1-204ENST00000549549 SPCS2Q15005 226 aa2.66□□□□□ -1.98
PRIM1-204ENST00000549549 NDUFA12Q9UI09 145 aa2.66□□□□□ -1.98
PRIM1-204ENST00000549549 ZGRF1Q86YA3 2104 aa2.65□□□□□ -1.98
PRIM1-204ENST00000549549 HELZ2Q9BYK8 2649 aaKnown RBP2.65□□□□□ -1.98
PRIM1-204ENST00000549549 TRAV12-2A0A075B6T6 113 aa2.65□□□□□ -1.99
PRIM1-204ENST00000549549 KCNRGQ8N5I3 272 aa2.65□□□□□ -1.99
PRIM1-204ENST00000549549 Q8N6K4 173 aa2.65□□□□□ -1.99
PRIM1-204ENST00000549549 C5orf56Q8N8D9 126 aa2.65□□□□□ -1.99
PRIM1-204ENST00000549549 MYH6P13533 1939 aa2.64□□□□□ -1.99
PRIM1-204ENST00000549549 TRBV30A0A0K0K1B3 111 aa2.64□□□□□ -1.99
PRIM1-204ENST00000549549 SPANXN1Q5VSR9 72 aa2.64□□□□□ -1.99
PRIM1-204ENST00000549549 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PRIM1-204ENST00000549549 NCOA3Q9Y6Q9 1424 aa2.63□□□□□ -1.99
PRIM1-204ENST00000549549 TFF1P04155 84 aa2.63□□□□□ -1.99
PRIM1-204ENST00000549549 CAV3P56539 151 aa2.63□□□□□ -1.99
PRIM1-204ENST00000549549 BCL9LQ86UU0 1499 aa2.63□□□□□ -1.99
PRIM1-204ENST00000549549 PIRTP0C851 137 aa2.62□□□□□ -1.99
PRIM1-204ENST00000549549 Q86TA4 180 aa2.62□□□□□ -1.99
PRIM1-204ENST00000549549 BLMP54132 1417 aaPredicted RBP2.61□□□□□ -1.99
PRIM1-204ENST00000549549 FAM25AB3EWG3 89 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 FAM25CB3EWG5 89 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 FAM25GB3EWG6 89 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 Q6ZS92 163 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 LINC00208Q96KT6 92 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 DLEC1Q9Y238 1755 aa2.61□□□□□ -1.99
PRIM1-204ENST00000549549 OR2T2Q6IF00 324 aa2.6□□□□□ -1.99
PRIM1-204ENST00000549549 C10orf99Q6UWK7 81 aa2.6□□□□□ -1.99
PRIM1-204ENST00000549549 NINQ8N4C6 2090 aa2.6□□□□□ -1.99
PRIM1-204ENST00000549549 KIF13AQ9H1H9 1805 aa2.59□□□□□ -1.99
PRIM1-204ENST00000549549 TEX49A0A1B0GTD5 131 aa2.59□□□□□ -1.99
PRIM1-204ENST00000549549 MBD5Q9P267 1494 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 AKAP11Q9UKA4 1901 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 RREB1Q92766 1687 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 A0A1B0GV90 55 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 APODP05090 189 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 IFI27L1Q96BM0 104 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 SNRNP25Q9BV90 132 aaKnown RBP2.58□□□□□ -2
PRIM1-204ENST00000549549 ROS1P08922 2347 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 CITO14578 2027 aa2.58□□□□□ -2
PRIM1-204ENST00000549549 PEG3Q9GZU2 1588 aa2.57□□□□□ -2
PRIM1-204ENST00000549549 ZNF142P52746 1687 aaPredicted RBP2.57□□□□□ -2
PRIM1-204ENST00000549549 A0A1W2PPM0 123 aa2.57□□□□□ -2
PRIM1-204ENST00000549549 FAM92AA1XBS5 289 aa2.57□□□□□ -2
PRIM1-204ENST00000549549 APOC1P02654 83 aa2.57□□□□□ -2
PRIM1-204ENST00000549549 TMEM242Q9NWH2 141 aa2.57□□□□□ -2
PRIM1-204ENST00000549549 ROCK2O75116 1388 aaKnown RBP2.57□□□□□ -2
PRIM1-204ENST00000549549 FOCADQ5VW36 1801 aa2.56□□□□□ -2
PRIM1-204ENST00000549549 CNTRLQ7Z7A1 2325 aa2.56□□□□□ -2
PRIM1-204ENST00000549549 IL5P05113 134 aa2.56□□□□□ -2
PRIM1-204ENST00000549549 SLC48A1Q6P1K1 146 aa2.56□□□□□ -2
PRIM1-204ENST00000549549 PDCD10Q9BUL8 212 aa2.56□□□□□ -2
PRIM1-204ENST00000549549 SNRNP200O75643 2136 aaKnown RBP2.56□□□□□ -2
PRIM1-204ENST00000549549 DLEU1O43261 78 aa2.55□□□□□ -2
PRIM1-204ENST00000549549 TMEM141Q96I45 108 aa2.55□□□□□ -2
PRIM1-204ENST00000549549 TSKUQ8WUA8 353 aa2.54□□□□□ -2
PRIM1-204ENST00000549549 OTOGLQ3ZCN5 2332 aa2.54□□□□□ -2
PRIM1-204ENST00000549549 DAPK1P53355 1430 aa2.53□□□□□ -2
PRIM1-204ENST00000549549 ATG2AQ2TAZ0 1938 aa2.53□□□□□ -2
PRIM1-204ENST00000549549 K7EIL1 84 aa2.53□□□□□ -2
PRIM1-204ENST00000549549 SPTSSAQ969W0 71 aa2.53□□□□□ -2
PRIM1-204ENST00000549549 LAMB1P07942 1786 aa2.53□□□□□ -2
PRIM1-204ENST00000549549 LAMA4Q16363 1823 aa2.52□□□□□ -2.01
PRIM1-204ENST00000549549 ASCC3Q8N3C0 2202 aaKnown RBP2.52□□□□□ -2.01
PRIM1-204ENST00000549549 PIPP12273 146 aaPredicted RBP2.52□□□□□ -2.01
PRIM1-204ENST00000549549 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.52□□□□□ -2.01
PRIM1-204ENST00000549549 CFTRP13569 1480 aa2.52□□□□□ -2.01
PRIM1-204ENST00000549549 NDUFB6O95139 128 aa2.51□□□□□ -2.01
PRIM1-204ENST00000549549 NPC2P61916 151 aa2.51□□□□□ -2.01
PRIM1-204ENST00000549549 BTG2P78543 158 aa2.51□□□□□ -2.01
PRIM1-204ENST00000549549 C9orf116Q5BN46 136 aaPredicted RBP2.51□□□□□ -2.01
PRIM1-204ENST00000549549 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
PRIM1-204ENST00000549549 COPS9Q8WXC6 57 aa2.51□□□□□ -2.01
PRIM1-204ENST00000549549 AGPAT4-IT1Q9H0P7 198 aa2.51□□□□□ -2.01
PRIM1-204ENST00000549549 TCRBV3S1A0A5B6 114 aa2.5□□□□□ -2.01
PRIM1-204ENST00000549549 KLKP1Q107X0 134 aa2.5□□□□□ -2.01
PRIM1-204ENST00000549549 ZNF56Q15929 161 aa2.5□□□□□ -2.01
PRIM1-204ENST00000549549 TRAV12-3A0A0B4J271 114 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms