RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 IGKV3D-20A0A0C4DH25 116 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 IGHV3-16A0A0C4DH30 117 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 OR5AL1P0C617 328 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 CACNG7P62955 275 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 WDR73Q6P4I2 378 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 ZFP82Q8N141 532 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 FER1L6-AS1Q8NA97 138 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 TSKUQ8WUA8 353 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 RNASE7Q9H1E1 156 aaKnown RBP7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 CDIP1Q9H305 208 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
SMARCD1-206ENST00000549274 NBEAL2Q6ZNJ1 2754 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 A0A087WWC5 75 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 CXorf65A6NEN9 183 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 ADCYAP1P18509 176 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 BTF3L4Q96K17 158 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 C9orf85Q96MD7 179 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 IMMP2LQ96T52 175 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 RETNQ9HD89 108 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 TMEM242Q9NWH2 141 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 C11orf21Q9P2W6 132 aa7.03□□□□□ -1.28
SMARCD1-206ENST00000549274 TMSB15BA0A087X1C1 80 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 A0A1B0GW15 77 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 A8MWV9 139 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 SNAI2O43623 268 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 APOC3P02656 99 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 S100A8P05109 93 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 S100PP25815 95 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 KCNIP4Q6PIL6 250 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 C11orf72Q8NBR9 251 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 C18orf15Q96N68 181 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 NOP10Q9NPE3 64 aaKnown RBP7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 GSN-AS1Q9NRJ2 163 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 V9GYV3 84 aa7.02□□□□□ -1.29
SMARCD1-206ENST00000549274 HUWE1Q7Z6Z7 4374 aaKnown RBP7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 TRAV9-1A0A075B6T8 112 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 H3BVH4 76 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 RHODO00212 210 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 GNRH2O43555 120 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 SPINK4O60575 86 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 ARMS2P0C7Q2 107 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 IGLC6P0CF74 106 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 RNASE3P12724 160 aaKnown RBP7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 AZU1P20160 251 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 CTRLP40313 264 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 EMP1P54849 157 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 DAD1P61803 113 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 SLAQ13239 276 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 RNF212Q495C1 297 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 ZNF876PQ49A33 203 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 SLC7A5P1Q8MH63 180 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 C11orf45Q8TAV5 145 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 RASL10AQ92737 203 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
SMARCD1-206ENST00000549274 TRGV2A0A075B6R0 118 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 TRGV1A0A0A0MS02 117 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 A0A0J9YWU9 116 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 SMIM27A0A1W2PRY6 76 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 GRIFINA4D1Z8 144 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 HIGD1CA8MV81 97 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 S100A1P23297 94 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 ATP5L2Q7Z4Y8 100 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 AP1S3Q96PC3 154 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 TPPP3Q9BW30 176 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 CNFNQ9BYD5 112 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 MDFICQ9P1T7 246 aa7□□□□□ -1.29
SMARCD1-206ENST00000549274 IGHV4-4A0A075B6R2 117 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 TRAV4A0A0B4J268 109 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 PLAC8L1A1L4L8 177 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 C7orf77A4D0Y5 90 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 NXPH4O95158 308 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 ATP5G1P05496 136 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 SMIM17P0DL12 118 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 RIGQ13278 110 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 Q6ZQT7 251 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
SMARCD1-206ENST00000549274 GAGE12BA1L429 117 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 M0R381 172 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 GAGE7O76087 117 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 GAGE12FP0CL80 117 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 GAGE12GP0CL81 117 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 GAGE12IP0CL82 117 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 COX19Q49B96 90 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 RASL11AQ6T310 242 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 LYZL1Q6UWQ5 148 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 ZFP2Q6ZN57 461 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 FAM210BQ96KR6 192 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 RPS10P5Q9NQ39 176 aa6.98□□□□□ -1.29
SMARCD1-206ENST00000549274 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
SMARCD1-206ENST00000549274 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms