RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ZNF479Q96JC4 524 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 U3KQE9 123 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 F5H697 171 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 F8VRH5 84 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 G3V4G9 280 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 H3BMG7 143 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 H3BUX3 64 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 H7C1H1 209 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 JPT2Q9H910 190 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 FAM208BQ5VWN6 2430 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 UTP20O75691 2785 aaKnown RBP9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 DPH3P1Q9H4G8 78 aa9.04□□□□□ -0.96
RAPGEF3-219ENST00000549151 PLNP26678 52 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 UCNP55089 124 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 MUC4Q99102 2169 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 A0A087WWL8 130 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 CD300EQ496F6 205 aaPredicted RBP9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 ITLN2Q8WWU7 325 aaPredicted RBP9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 MRAP2Q96G30 205 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 LINC00477Q96M19 166 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 RHPN1-AS1Q9BWJ2 59 aa9.03□□□□□ -0.96
RAPGEF3-219ENST00000549151 IGLL5B9A064 214 aa9.02□□□□□ -0.96
RAPGEF3-219ENST00000549151 WFDC2Q14508 124 aa9.02□□□□□ -0.96
RAPGEF3-219ENST00000549151 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.96
RAPGEF3-219ENST00000549151 FAM74A4Q5TZK3 123 aa9.02□□□□□ -0.96
RAPGEF3-219ENST00000549151 PKD1L2Q7Z442 2459 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 IGHV4-61A0A0C4DH41 118 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 FAM223BA6NKX1 122 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 IGHV1-69P01742 117 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 TMEM95Q3KNT9 176 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 FAM223AQ8IWN6 122 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 USP9XQ93008 2570 aaPredicted RBP9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 PHLDA1Q8WV24 401 aaPredicted RBP9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 TM2D2Q9BX73 214 aa9.02□□□□□ -0.97
RAPGEF3-219ENST00000549151 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 SH2D6Q7Z4S9 175 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 KLHL30-AS1Q8NEE0 82 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 ZANQ9Y493 2812 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 EPG5Q9HCE0 2579 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 MYO9AB2RTY4 2548 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 IGHV4-4A0A075B6R2 117 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 OVOL1O14753 267 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 DUSP14O95147 198 aaKnown RBP9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 HLA-DRB4P13762 266 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 PSMG4Q5JS54 123 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 PRADC1Q9BSG0 188 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 HLA-DRB4X5D2U9 266 aa9.01□□□□□ -0.97
RAPGEF3-219ENST00000549151 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 ETDBQ3ZM63 59 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 BAALCQ8WXS3 180 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 ZNF815PA8K554 130 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 NDUFA4O00483 81 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 GNLYP22749 145 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 SRSF9Q13242 221 aaKnown RBP eCLIP9□□□□□ -0.97
RAPGEF3-219ENST00000549151 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 SLC25A16P16260 332 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 TOMM6Q96B49 74 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 CFAP46Q8IYW2 2715 aa9□□□□□ -0.97
RAPGEF3-219ENST00000549151 CSMD2Q7Z408 3487 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 CD7P09564 240 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 RNASE3P12724 160 aaKnown RBP8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 NEXN-AS1Q8NBZ9 246 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 CUBNO60494 3623 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 FAM159AQ6UWV7 190 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 TP53TG1Q9Y2A0 90 aa8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 ZNF256Q9Y2P7 627 aaPredicted RBP8.99□□□□□ -0.97
RAPGEF3-219ENST00000549151 E9PLD3 99 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 APOMO95445 188 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 LGALS1P09382 135 aaKnown RBP8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 FOXI2Q6ZQN5 318 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 LENEPQ9Y5L5 61 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 SOCS3O14543 225 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 ZNF688P0C7X2 276 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
RAPGEF3-219ENST00000549151 LOC107984156A0A0G2JMH3 177 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 ARL17AQ8IVW1 177 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 MRPL16Q9NX20 251 aaKnown RBP8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 TRAV12-1A0A0B4J245 112 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 HTN1P15515 57 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 KLK9Q2XQG4 91 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 TMEM170BQ5T4T1 132 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 C10orf99Q6UWK7 81 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 KLK9Q9UKQ9 250 aa8.97□□□□□ -0.97
RAPGEF3-219ENST00000549151 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.97
RAPGEF3-219ENST00000549151 RNF223E7ERA6 249 aa8.96□□□□□ -0.97
RAPGEF3-219ENST00000549151 TGFAP01135 160 aa8.96□□□□□ -0.97
RAPGEF3-219ENST00000549151 RRN3P1Q2M238 152 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms