RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 PFDN1O60925 122 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 ASIPP42127 132 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 ZC2HC1AQ96GY0 325 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 TCEAL7Q9BRU2 100 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 B4DEV8 164 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 H3BVH4 76 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 M0R036 132 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 AKR1C3P42330 323 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 RHOHQ15669 191 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 SH2D6Q7Z4S9 175 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 SLC25A29Q8N8R3 303 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 RYR1P21817 5038 aa10.02□□□□□ -0.81
LINC00661-203ENST00000549131 CIDEAO60543 219 aa10.01□□□□□ -0.81
LINC00661-203ENST00000549131 PAGE4O60829 102 aa10.01□□□□□ -0.81
LINC00661-203ENST00000549131 SH2D1AO60880 128 aa10.01□□□□□ -0.81
LINC00661-203ENST00000549131 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
LINC00661-203ENST00000549131 ZFP30Q9Y2G7 519 aa10.01□□□□□ -0.81
LINC00661-203ENST00000549131 TRAV9-2A0A087WT02 112 aa10□□□□□ -0.81
LINC00661-203ENST00000549131 TRBV6-4A0A1B0GX49 114 aa10□□□□□ -0.81
LINC00661-203ENST00000549131 MGST1P10620 155 aaKnown RBP10□□□□□ -0.81
LINC00661-203ENST00000549131 EVI2AP22794 236 aa10□□□□□ -0.81
LINC00661-203ENST00000549131 EIF5AP63241 154 aaKnown RBP10□□□□□ -0.81
LINC00661-203ENST00000549131 LGALSLQ3ZCW2 172 aaPredicted RBP10□□□□□ -0.81
LINC00661-203ENST00000549131 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
LINC00661-203ENST00000549131 PTH2Q96A98 100 aa10□□□□□ -0.81
LINC00661-203ENST00000549131 LTAP01374 205 aa9.99□□□□□ -0.81
LINC00661-203ENST00000549131 TPT1P13693 172 aaKnown RBP9.99□□□□□ -0.81
LINC00661-203ENST00000549131 TMUB2Q71RG4 321 aa9.99□□□□□ -0.81
LINC00661-203ENST00000549131 PARLQ9H300 379 aa9.99□□□□□ -0.81
LINC00661-203ENST00000549131 IL36BQ9NZH7 164 aa9.99□□□□□ -0.81
LINC00661-203ENST00000549131 TMSB15BA0A087X1C1 80 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 TRBV6-1A0A0K0K1D8 114 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 A8MWV9 139 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 KRBOX1C9JBD0 128 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 CRYGDP07320 174 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 CRIP1P50238 77 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 ERVFC1-1P60608 527 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
LINC00661-203ENST00000549131 SCO2A0A1W2PP80 73 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 K7EP13 123 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 TIRAPP58753 221 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 ZNF674Q2M3X9 581 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 COX8CQ7Z4L0 72 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 C10orf126Q8N4M7 172 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 LRP1BQ9NZR2 4599 aa9.97□□□□□ -0.81
LINC00661-203ENST00000549131 TRAV8-6A0A0B4J262 113 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 ARMS2P0C7Q2 107 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 JPT2Q9H910 190 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.82
LINC00661-203ENST00000549131 IGHV3-38A0A0C4DH36 116 aa9.95□□□□□ -0.82
LINC00661-203ENST00000549131 M0R381 172 aa9.95□□□□□ -0.82
LINC00661-203ENST00000549131 EREGO14944 169 aa9.95□□□□□ -0.82
LINC00661-203ENST00000549131 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
LINC00661-203ENST00000549131 DNLZQ5SXM8 178 aa9.95□□□□□ -0.82
LINC00661-203ENST00000549131 ATP6V0E2Q8NHE4 81 aa9.95□□□□□ -0.82
LINC00661-203ENST00000549131 SAMD10Q9BYL1 202 aa9.95□□□□□ -0.82
LINC00661-203ENST00000549131 DNAH5Q8TE73 4624 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 GAGE12JA6NER3 117 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 RHODO00212 210 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 GAGE1Q13065 139 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 GAGE4Q13068 117 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 GAGE5Q13069 117 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 DMRTA1Q5VZB9 504 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 Q6ZSN1 163 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 KRTAP17-1Q9BYP8 105 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
LINC00661-203ENST00000549131 HSPG2P98160 4391 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 LINC01556Q5JQF7 62 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 LELP1Q5T871 98 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 PRR27Q6MZM9 219 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
LINC00661-203ENST00000549131 MANBALQ9NQG1 85 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 GNG13Q9P2W3 67 aa9.93□□□□□ -0.82
LINC00661-203ENST00000549131 A0A087WWL8 130 aa9.92□□□□□ -0.82
LINC00661-203ENST00000549131 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
LINC00661-203ENST00000549131 IGHV3-33P01772 117 aa9.92□□□□□ -0.82
LINC00661-203ENST00000549131 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
LINC00661-203ENST00000549131 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
LINC00661-203ENST00000549131 RPL19P84098 196 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms