RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
RAPGEF3-218ENST00000548919 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
RAPGEF3-218ENST00000548919 PRSS29PA6NIE9 313 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 LGALS1P09382 135 aaKnown RBP10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 EMP1P54849 157 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 KLRB1Q12918 225 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 SRD5A1P18405 259 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 RRN3P1Q2M238 152 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 WFDC12Q8WWY7 111 aa10.68□□□□□ -0.7
RAPGEF3-218ENST00000548919 F8W1H4 67 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 SOCS3O14543 225 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 SFTA2Q6UW10 78 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 MOB4Q9Y3A3 225 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 TSSC4Q9Y5U2 329 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 SPTBN4Q9H254 2564 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 LY6EQ16553 131 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 C19orf54Q5BKX5 351 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 PLEKHB2Q96CS7 222 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 C20orf78Q9BR46 151 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
RAPGEF3-218ENST00000548919 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 FAM223BA6NKX1 122 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 SCGB2A2Q13296 93 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 FAM223AQ8IWN6 122 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 KLHL30-AS1Q8NEE0 82 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 AZU1P20160 251 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 INSL3P51460 131 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 MORN3Q6PF18 240 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 JPT2Q9H910 190 aa10.66□□□□□ -0.7
RAPGEF3-218ENST00000548919 ZNF815PA8K554 130 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 EDN2P20800 178 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 SAMD13Q5VXD3 122 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 OVOL1O14753 267 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 SLC25A16P16260 332 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 GAGE13Q4V321 117 aa10.65□□□□□ -0.7
RAPGEF3-218ENST00000548919 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.71
RAPGEF3-218ENST00000548919 SPAG8Q99932 426 aaPredicted RBP10.65□□□□□ -0.71
RAPGEF3-218ENST00000548919 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.71
RAPGEF3-218ENST00000548919 HOXA3O43365 443 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF3-218ENST00000548919 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
RAPGEF3-218ENST00000548919 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
RAPGEF3-218ENST00000548919 NDUFA4O00483 81 aa10.64□□□□□ -0.71
RAPGEF3-218ENST00000548919 CRYGDP07320 174 aa10.64□□□□□ -0.71
RAPGEF3-218ENST00000548919 GAGE12HA6NDE8 117 aa10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 TSHBP01222 138 aa10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 Q6ZS46 218 aa10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 A0A087WWL8 130 aa10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
RAPGEF3-218ENST00000548919 C11orf86A6NJI1 115 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 PF4V1P10720 104 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 RHPN1-AS1Q9BWJ2 59 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 TP53TG1Q9Y2A0 90 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 LINC01549A6NIU2 74 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 SIGMAR1Q99720 223 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 SPG11Q96JI7 2443 aa10.62□□□□□ -0.71
RAPGEF3-218ENST00000548919 COX6B1P14854 86 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 LINC00315P59091 139 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 BLCAPP62952 87 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 LINC01619G3V211 115 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 IGHV4-38-2P0DP08 117 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 CSMD2Q7Z408 3487 aa10.61□□□□□ -0.71
RAPGEF3-218ENST00000548919 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 F5H697 171 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 APOMO95445 188 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 ZFP2Q6ZN57 461 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 LOC107984156A0A0G2JMH3 177 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 H3BUX3 64 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 IGHV4-39P01824 125 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 ARL17AQ8IVW1 177 aa10.6□□□□□ -0.71
RAPGEF3-218ENST00000548919 CRIP2P52943 208 aaPredicted RBP10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 LY6DQ14210 128 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 ATP6V0BQ99437 205 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 TRAV12-3A0A0B4J271 114 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 J3QR89 54 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 TSPEAR-AS2P59090 65 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 FAM74A4Q5TZK3 123 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
RAPGEF3-218ENST00000548919 TSPAN13O95857 204 aa10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 CD7P09564 240 aa10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 PSMB2P49721 201 aa10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 SMCPP49901 116 aaPredicted RBP10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
RAPGEF3-218ENST00000548919 UTP20O75691 2785 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms