RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
SSH1-208ENST00000548522 NBEAP1P0C6P0 100 aa11.29□□□□□ -0.6
SSH1-208ENST00000548522 CT45A10P0DMU9 189 aa11.29□□□□□ -0.6
SSH1-208ENST00000548522 HIST1H1EP10412 219 aaKnown RBP11.29□□□□□ -0.6
SSH1-208ENST00000548522 GNG4P50150 75 aa11.29□□□□□ -0.6
SSH1-208ENST00000548522 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
SSH1-208ENST00000548522 DERL1Q9BUN8 251 aa11.29□□□□□ -0.6
SSH1-208ENST00000548522 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 H3BNG1 76 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 CXCL1P09341 107 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 XGP55808 180 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
SSH1-208ENST00000548522 PDE6HQ13956 83 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 OSTCQ9NRP0 149 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 KLF12Q9Y4X4 402 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 TNFRSF18Q9Y5U5 241 aa11.28□□□□□ -0.6
SSH1-208ENST00000548522 TGIF2-C20orf24A0A0A6YYL0 155 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 PEX7O00628 323 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 GCGP01275 180 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 IGLC2P0DOY2 106 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 PYYP10082 97 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 RPS10P46783 165 aaKnown RBP11.27□□□□□ -0.61
SSH1-208ENST00000548522 CENPWQ5EE01 88 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 OR10G8Q8NGN5 311 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 OCC1Q8TAD7 63 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 OTORQ9NRC9 128 aa11.27□□□□□ -0.61
SSH1-208ENST00000548522 C5orf52A6NGY3 159 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 S100A6P06703 90 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 DNAH10OSP0CZ25 163 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
SSH1-208ENST00000548522 TMEM183BQ1AE95 376 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 FAM231DQ6ZW35 169 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 GSN-AS1Q9NRJ2 163 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 URGCP-MRPS24S4R325 110 aa11.26□□□□□ -0.61
SSH1-208ENST00000548522 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
SSH1-208ENST00000548522 ZNF253O75346 499 aa11.25□□□□□ -0.61
SSH1-208ENST00000548522 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
SSH1-208ENST00000548522 Q5VSD8 79 aa11.25□□□□□ -0.61
SSH1-208ENST00000548522 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
SSH1-208ENST00000548522 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
SSH1-208ENST00000548522 SRRM2Q9UQ35 2752 aaKnown RBP11.24□□□□□ -0.61
SSH1-208ENST00000548522 TRGV2A0A075B6R0 118 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 K7EN84 100 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 PHOX2AO14813 284 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 SIVA1O15304 175 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 NXPH4O95158 308 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 KRTAP10-1P60331 282 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 COX19Q49B96 90 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 FMC1Q96HJ9 113 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 IL36BQ9NZH7 164 aa11.24□□□□□ -0.61
SSH1-208ENST00000548522 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
SSH1-208ENST00000548522 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
SSH1-208ENST00000548522 LEPP41159 167 aa11.23□□□□□ -0.61
SSH1-208ENST00000548522 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
SSH1-208ENST00000548522 TRBV19A0A075B6N1 114 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 M0R3E3 92 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 IGLV2-8P01709 118 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 ERVFC1-1P60608 527 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 ERCC8Q13216 396 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 V9GYV3 84 aa11.22□□□□□ -0.61
SSH1-208ENST00000548522 PGPA6NDG6 321 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 TCRAP04437 139 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 S100A8P05109 93 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.61
SSH1-208ENST00000548522 HAMPP81172 84 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 Q6ZQT7 251 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
SSH1-208ENST00000548522 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.62
SSH1-208ENST00000548522 C7orf71A4D174 169 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 PGPEP1LA6NFU8 196 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 UBE2G1P62253 170 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 RANP62826 216 aaKnown RBP11.2□□□□□ -0.62
SSH1-208ENST00000548522 CT83Q5H943 113 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 ZFP82Q8N141 532 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
SSH1-208ENST00000548522 A0A087WTM6 91 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 KLLNB2CW77 178 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 K7EQM0 130 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 SPINK4O60575 86 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BKO60814 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 ZNF324O75467 553 aaPredicted RBP11.19□□□□□ -0.62
SSH1-208ENST00000548522 LTAP01374 205 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
SSH1-208ENST00000548522 TRGC2P03986 189 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BJP06899 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BOP23527 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BBP33778 126 aa11.19□□□□□ -0.62
SSH1-208ENST00000548522 HIST1H2BDP58876 126 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms