RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 PIK3CD-AS1Q5SR53 167 aa13.14□□□□□ -0.31
GATC-202ENST00000548171 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
GATC-202ENST00000548171 RNF222A6NCQ9 220 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 GAGE12JA6NER3 117 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 A8MWV9 139 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 K7EQM0 130 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 EIF3GO75821 320 aaKnown RBP eCLIP13.13□□□□□ -0.31
GATC-202ENST00000548171 GCGP01275 180 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
GATC-202ENST00000548171 GAGE1Q13065 139 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 GAGE4Q13068 117 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 GAGE5Q13069 117 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 ZFP69Q49AA0 526 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 GAGE13Q4V321 117 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 CYB561D1Q8N8Q1 229 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 CIRBP-AS1Q8TBR5 109 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 URGCP-MRPS24S4R325 110 aa13.13□□□□□ -0.31
GATC-202ENST00000548171 RNASE3P12724 160 aaKnown RBP13.12□□□□□ -0.31
GATC-202ENST00000548171 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
GATC-202ENST00000548171 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
GATC-202ENST00000548171 SGK494Q96LW2 274 aa13.12□□□□□ -0.31
GATC-202ENST00000548171 PARLQ9H300 379 aa13.12□□□□□ -0.31
GATC-202ENST00000548171 IGLV2-8P01709 118 aa13.11□□□□□ -0.31
GATC-202ENST00000548171 TCRAP04437 139 aa13.11□□□□□ -0.31
GATC-202ENST00000548171 PET100P0DJ07 73 aa13.11□□□□□ -0.31
GATC-202ENST00000548171 PPP1R1CQ8WVI7 109 aa13.11□□□□□ -0.31
GATC-202ENST00000548171 SMUG1Q53HV7 270 aa13.1□□□□□ -0.31
GATC-202ENST00000548171 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
GATC-202ENST00000548171 SMIM3Q9BZL3 60 aa13.1□□□□□ -0.31
GATC-202ENST00000548171 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
GATC-202ENST00000548171 HMCN2Q8NDA2 5059 aa13.09□□□□□ -0.31
GATC-202ENST00000548171 IGKV2D-24A0A075B6R9 120 aa13.09□□□□□ -0.31
GATC-202ENST00000548171 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
GATC-202ENST00000548171 LINC00479Q96M42 142 aa13.09□□□□□ -0.31
GATC-202ENST00000548171 LRP1Q07954 4544 aaKnown RBP13.09□□□□□ -0.31
GATC-202ENST00000548171 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
GATC-202ENST00000548171 H2BFSP57053 126 aa13.08□□□□□ -0.32
GATC-202ENST00000548171 RAB2AP61019 212 aa13.08□□□□□ -0.32
GATC-202ENST00000548171 LGALSLQ3ZCW2 172 aaPredicted RBP13.08□□□□□ -0.32
GATC-202ENST00000548171 NIT1Q86X76 327 aa13.08□□□□□ -0.32
GATC-202ENST00000548171 OR10G7Q8NGN6 311 aa13.08□□□□□ -0.32
GATC-202ENST00000548171 OR2T35Q8NGX2 323 aa13.08□□□□□ -0.32
GATC-202ENST00000548171 ENKURQ8TC29 256 aa13.08□□□□□ -0.32
GATC-202ENST00000548171 UBR4Q5T4S7 5183 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
GATC-202ENST00000548171 MPC2O95563 127 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 ARL14EPLP0DKL9 152 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 FLI1Q01543 452 aaPredicted RBP13.07□□□□□ -0.32
GATC-202ENST00000548171 ELOBQ15370 118 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 CHCHD7Q9BUK0 85 aa13.07□□□□□ -0.32
GATC-202ENST00000548171 S100A4P26447 101 aaKnown RBP13.06□□□□□ -0.32
GATC-202ENST00000548171 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
GATC-202ENST00000548171 UFSP1Q6NVU6 142 aa13.06□□□□□ -0.32
GATC-202ENST00000548171 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
GATC-202ENST00000548171 KLK12Q9UKR0 248 aa13.06□□□□□ -0.32
GATC-202ENST00000548171 RHODO00212 210 aa13.05□□□□□ -0.32
GATC-202ENST00000548171 STAG3L2P0CL84 134 aa13.05□□□□□ -0.32
GATC-202ENST00000548171 STAG3L3P0CL85 134 aa13.05□□□□□ -0.32
GATC-202ENST00000548171 ATRAIDQ6UW56 229 aa13.05□□□□□ -0.32
GATC-202ENST00000548171 PRNTQ86SH4 94 aa13.05□□□□□ -0.32
GATC-202ENST00000548171 Q9UF83 564 aa13.05□□□□□ -0.32
GATC-202ENST00000548171 A0A087WX48 190 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 ASIPP42127 132 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 CDC34P49427 236 aaPredicted RBP13.04□□□□□ -0.32
GATC-202ENST00000548171 Q0VG73 95 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 KCNIP4Q6PIL6 250 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 C14orf178Q8N769 122 aaPredicted RBP13.04□□□□□ -0.32
GATC-202ENST00000548171 SUN5Q8TC36 379 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 UBE2WQ96B02 151 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 WFDC1Q9HC57 220 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 IL36BQ9NZH7 164 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 EPDR1Q9UM22 224 aa13.04□□□□□ -0.32
GATC-202ENST00000548171 IGKV3D-20A0A0C4DH25 116 aa13.03□□□□□ -0.32
GATC-202ENST00000548171 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
GATC-202ENST00000548171 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
GATC-202ENST00000548171 GCHFRP30047 84 aa13.02□□□□□ -0.33
GATC-202ENST00000548171 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
GATC-202ENST00000548171 SUMO1P63165 101 aaKnown RBP13.02□□□□□ -0.33
GATC-202ENST00000548171 INMT-MINDY4F8WBC2 141 aa13.01□□□□□ -0.33
GATC-202ENST00000548171 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
GATC-202ENST00000548171 JPT2Q9H910 190 aa13.01□□□□□ -0.33
GATC-202ENST00000548171 FABP5P3A8MUU1 101 aa13□□□□□ -0.33
GATC-202ENST00000548171 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
GATC-202ENST00000548171 OR2G3Q8NGZ4 309 aa13□□□□□ -0.33
GATC-202ENST00000548171 S100ZQ8WXG8 99 aa13□□□□□ -0.33
GATC-202ENST00000548171 C1orf43Q9BWL3 253 aa13□□□□□ -0.33
GATC-202ENST00000548171 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
GATC-202ENST00000548171 TRBV10-1A0A0K0K1A3 114 aa12.98□□□□□ -0.33
GATC-202ENST00000548171 H3BVH4 76 aa12.98□□□□□ -0.33
GATC-202ENST00000548171 SSNA1O43805 119 aa12.98□□□□□ -0.33
GATC-202ENST00000548171 DNLZQ5SXM8 178 aa12.98□□□□□ -0.33
GATC-202ENST00000548171 FAM74A4Q5TZK3 123 aa12.98□□□□□ -0.33
GATC-202ENST00000548171 B4DEV8 164 aa12.97□□□□□ -0.33
GATC-202ENST00000548171 CXorf1O96002 111 aa12.97□□□□□ -0.33
GATC-202ENST00000548171 MBP02144 154 aa12.97□□□□□ -0.33
GATC-202ENST00000548171 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
GATC-202ENST00000548171 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms