RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 OR2G3Q8NGZ4 309 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 LINC00479Q96M42 142 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 AQP10Q96PS8 301 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 TXNDC17Q9BRA2 123 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 PSMG3Q9BT73 122 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-211ENST00000547950 MSRB1Q9NZV6 116 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 C11orf21Q9P2W6 132 aa4.55□□□□□ -1.68
SCAF11-211ENST00000547950 FXYD6-FXYD2A0A087WZ82 144 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 BORCS7-ASMTA0A0B4J1R7 106 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 TRAV34A0A0B4J273 112 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 SERTM2A0A1B0GWG4 89 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 FBLL1A6NHQ2 334 aaKnown RBP4.54□□□□□ -1.68
SCAF11-211ENST00000547950 GGTLC3B5MD39 225 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 IGLV2-11P01706 119 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 PLA2G1BP04054 148 aaKnown RBP4.54□□□□□ -1.68
SCAF11-211ENST00000547950 CRYGDP07320 174 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 DNAH10OSP0CZ25 163 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 FLI1Q01543 452 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-211ENST00000547950 ZFP69Q49AA0 526 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 SMUG1Q53HV7 270 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 CFAP126Q5VTH2 177 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 Q8N1X5 172 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 SLC25A29Q8N8R3 303 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 SUN5Q8TC36 379 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 PRADC1Q9BSG0 188 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 TMEM167BQ9NRX6 74 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 TNFSF18Q9UNG2 199 aa4.54□□□□□ -1.68
SCAF11-211ENST00000547950 A0A087WTM6 91 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 TRAV8-6A0A0B4J262 113 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 IGHV3-38A0A0C4DH36 116 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 PGPEP1LA6NFU8 196 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 RS1O15537 224 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 PFN1P07737 140 aaKnown RBP4.53□□□□□ -1.68
SCAF11-211ENST00000547950 GIPP09681 153 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-211ENST00000547950 GATA1P15976 413 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-211ENST00000547950 S100A4P26447 101 aaKnown RBP4.53□□□□□ -1.68
SCAF11-211ENST00000547950 FGF8P55075 233 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-211ENST00000547950 UBE2G2P60604 165 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 OR10J3Q5JRS4 329 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 SAPCD1Q5SSQ6 148 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 DPPA3Q6W0C5 159 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 SH2D6Q7Z4S9 175 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 CYB561D1Q8N8Q1 229 aa4.53□□□□□ -1.68
SCAF11-211ENST00000547950 TRBV6-4A0A1B0GX49 114 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 RNF222A6NCQ9 220 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 FABP5P3A8MUU1 101 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 K7EP13 123 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 PSCAO43653 123 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 IGHV3-30-3P0DP02 117 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
SCAF11-211ENST00000547950 RHOHQ15669 191 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 ZNF726P1Q15940 193 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 LGALSLQ3ZCW2 172 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-211ENST00000547950 ZNF506Q5JVG8 444 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 AKR1C8PQ5T2L2 129 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 Q6ZSN1 163 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 OR2T35Q8NGX2 323 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 ARL2-SNX15V9GYD0 113 aa4.52□□□□□ -1.69
SCAF11-211ENST00000547950 IGKV3D-20A0A0C4DH25 116 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 CTXND1A0A1B0GTU2 59 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 M0R036 132 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 PEX7O00628 323 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 ARPC5O15511 151 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 CIDEAO60543 219 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 MGST1P10620 155 aaKnown RBP4.51□□□□□ -1.69
SCAF11-211ENST00000547950 ASIPP42127 132 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 TIRAPP58753 221 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 GAGE1Q13065 139 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 GAGE4Q13068 117 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 GAGE5Q13069 117 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 GAGE13Q4V321 117 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 Q9HAA7 133 aa4.51□□□□□ -1.69
SCAF11-211ENST00000547950 TMSB15BA0A087X1C1 80 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 GRIFINA4D1Z8 144 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 FAM74A7A6NL05 159 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 IBA57-AS1B1ANH7 110 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 EPM2AB3EWF7 344 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 B4DEV8 164 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 GCSHP23434 173 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 CRIP1P50238 77 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 XGP55808 180 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 LINC01556Q5JQF7 62 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 LELP1Q5T871 98 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 HIST1H2BAQ96A08 127 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 PTH2Q96A98 100 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 SAMD10Q9BYL1 202 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 GTSF1LQ9H1H1 148 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 PARLQ9H300 379 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms