RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 MORN3Q6PF18 240 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-215ENST00000547672 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-215ENST00000547672 DPH3P1Q9H4G8 78 aa9.94□□□□□ -0.82
PTCH1-215ENST00000547672 TIMM8BQ9Y5J9 83 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-215ENST00000547672 ZNF469Q96JG9 3925 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-215ENST00000547672 MUC21A0A0G2JKD1 596 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 MUC21A0A140T8X8 626 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 D6R8Y8 96 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 M0R381 172 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 KRTAP10-3P60369 221 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 JOSD1Q15040 202 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-215ENST00000547672 ODF3L2Q3SX64 289 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 MAP1LC3AQ9H492 121 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
PTCH1-215ENST00000547672 MSRB1Q9NZV6 116 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 TP53TG3Q9ULZ0 132 aa9.93□□□□□ -0.82
PTCH1-215ENST00000547672 NF1P21359 2839 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 TRAV12-2A0A075B6T6 113 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 IGHV3-16A0A0C4DH30 117 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 CBY3A6NI87 242 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
PTCH1-215ENST00000547672 S100A12P80511 92 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 IQCJQ1A5X6 159 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 GTSCR1Q86UQ5 136 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 PTH2Q96A98 100 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 SPXQ9BT56 116 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 NDUFAF3Q9BU61 184 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 AP5S1Q9NUS5 200 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 HIVEP1P15822 2718 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 ZFHX3Q15911 3703 aa9.92□□□□□ -0.82
PTCH1-215ENST00000547672 NUPR1O60356 82 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 KIR3DS1Q14943 382 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
PTCH1-215ENST00000547672 Q8N1Y9 231 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 RNF185Q96GF1 192 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 C9orf85Q96MD7 179 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 LINC01587Q99440 93 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 GSN-AS1Q9NRJ2 163 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 HSPB8Q9UJY1 196 aa9.91□□□□□ -0.82
PTCH1-215ENST00000547672 NSD1Q96L73 2696 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-215ENST00000547672 PRSS47A8MTI9 375 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 K7EMI3 77 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 EVI2AP22794 236 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 G0S2P27469 103 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 HIST2H2BDQ6DRA6 164 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 Q6ZQT7 251 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 DEFB125Q8N687 156 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 TMEM208Q9BTX3 173 aa9.9□□□□□ -0.82
PTCH1-215ENST00000547672 ZMAT5Q9UDW3 170 aaKnown RBP9.9□□□□□ -0.82
PTCH1-215ENST00000547672 ANK3Q12955 4377 aaKnown RBP9.89□□□□□ -0.83
PTCH1-215ENST00000547672 CRXO43186 299 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-215ENST00000547672 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
PTCH1-215ENST00000547672 LINC00310P59036 64 aa9.89□□□□□ -0.83
PTCH1-215ENST00000547672 RCHY1Q96PM5 261 aa9.89□□□□□ -0.83
PTCH1-215ENST00000547672 C20orf78Q9BR46 151 aa9.89□□□□□ -0.83
PTCH1-215ENST00000547672 NIT2Q9NQR4 276 aa9.89□□□□□ -0.83
PTCH1-215ENST00000547672 GOLT1BQ9Y3E0 138 aa9.89□□□□□ -0.83
PTCH1-215ENST00000547672 SCGB1D1O95968 90 aa9.88□□□□□ -0.83
PTCH1-215ENST00000547672 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
PTCH1-215ENST00000547672 WFDC9Q8NEX5 89 aa9.88□□□□□ -0.83
PTCH1-215ENST00000547672 TMEM158Q8WZ71 300 aa9.88□□□□□ -0.83
PTCH1-215ENST00000547672 ZNF747Q9BV97 191 aa9.88□□□□□ -0.83
PTCH1-215ENST00000547672 M0R2P5 195 aa9.87□□□□□ -0.83
PTCH1-215ENST00000547672 FXYD7P58549 80 aa9.87□□□□□ -0.83
PTCH1-215ENST00000547672 PYY3Q5JQD4 70 aa9.87□□□□□ -0.83
PTCH1-215ENST00000547672 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-215ENST00000547672 FN1P02751 2386 aaKnown RBP9.87□□□□□ -0.83
PTCH1-215ENST00000547672 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
PTCH1-215ENST00000547672 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
PTCH1-215ENST00000547672 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 LINC01549A6NIU2 74 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 A8MWV9 139 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 H7C1H1 209 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 LEPROTL1O95214 131 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
PTCH1-215ENST00000547672 ZNF876PQ49A33 203 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 Q8N8P6 123 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 MDFICQ9P1T7 246 aa9.86□□□□□ -0.83
PTCH1-215ENST00000547672 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 C20orf202A1L168 122 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 TCAPO15273 167 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 NPYP01303 97 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 BTF3P20290 206 aaKnown RBP9.85□□□□□ -0.83
PTCH1-215ENST00000547672 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-215ENST00000547672 KRTDAPP60985 99 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 ZNF124Q15973 351 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 C3orf56Q8N813 242 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 MAP1LC3CQ9BXW4 147 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 WNK1Q9H4A3 2382 aa9.85□□□□□ -0.83
PTCH1-215ENST00000547672 SORL1Q92673 2214 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 F5H697 171 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 RHODO00212 210 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 MGPP08493 103 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 HTN1P15515 57 aa9.84□□□□□ -0.83
PTCH1-215ENST00000547672 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
PTCH1-215ENST00000547672 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms