RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 OR9G4Q8NGQ1 327 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 RASL10AQ92737 203 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 IGKCP01834 107 aa11.64□□□□□ -0.55
BRF1-212ENST00000547562 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
BRF1-212ENST00000547562 SIVA1O15304 175 aa11.64□□□□□ -0.55
BRF1-212ENST00000547562 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
BRF1-212ENST00000547562 PCP2Q8IVA1 136 aa11.64□□□□□ -0.55
BRF1-212ENST00000547562 AP1S3Q96PC3 154 aa11.64□□□□□ -0.55
BRF1-212ENST00000547562 C20orf78Q9BR46 151 aa11.64□□□□□ -0.55
BRF1-212ENST00000547562 NXPH4O95158 308 aa11.63□□□□□ -0.55
BRF1-212ENST00000547562 Q6YL49 198 aa11.63□□□□□ -0.55
BRF1-212ENST00000547562 DPM2O94777 84 aa11.62□□□□□ -0.55
BRF1-212ENST00000547562 IGHV4-31P0DP07 118 aa11.62□□□□□ -0.55
BRF1-212ENST00000547562 FAM159AQ6UWV7 190 aa11.62□□□□□ -0.55
BRF1-212ENST00000547562 RPL39LQ96EH5 51 aaKnown RBP11.62□□□□□ -0.55
BRF1-212ENST00000547562 MGPP08493 103 aa11.62□□□□□ -0.55
BRF1-212ENST00000547562 LGALS1P09382 135 aaKnown RBP11.62□□□□□ -0.55
BRF1-212ENST00000547562 SEC11AP67812 179 aa11.62□□□□□ -0.55
BRF1-212ENST00000547562 C7orf71A4D174 169 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 ZNF688P0C7X2 276 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 ORMDL2Q53FV1 153 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 ZNF843Q8N446 348 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 WFDC12Q8WWY7 111 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 ZNF702PQ9H963 129 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
BRF1-212ENST00000547562 ELANEP08246 267 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 SYNJ2BPP57105 145 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
BRF1-212ENST00000547562 ABCA12Q86UK0 2595 aa11.61□□□□□ -0.55
BRF1-212ENST00000547562 IGKV2D-26A0A0A0MRZ7 120 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 K7EMI3 77 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 KRTAP10-9P60411 292 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 VAMP3Q15836 100 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 ADAMTSL5Q6ZMM2 481 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 POM121L12Q8N7R1 296 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 ODF3Q96PU9 254 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 MRPL35Q9NZE8 188 aaKnown RBP11.6□□□□□ -0.55
BRF1-212ENST00000547562 CREBBPQ92793 2442 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 A0A087WW49 117 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 K7EQG2 157 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 LGALS9O00182 355 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 HSD52Q0P140 79 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 ERASQ7Z444 233 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 AGRNO00468 2067 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
BRF1-212ENST00000547562 A0A087WX48 190 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 A0A0J9YX75 114 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 CBY3A6NI87 242 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.59□□□□□ -0.55
BRF1-212ENST00000547562 PPP1R17O96001 155 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 UBE2E2Q96LR5 201 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 KIF25-AS1Q9Y6Z4 181 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 HOXA3O43365 443 aaPredicted RBP11.59□□□□□ -0.55
BRF1-212ENST00000547562 ZC2HC1BQ5TFG8 222 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 TMEM160Q9NX00 188 aa11.59□□□□□ -0.55
BRF1-212ENST00000547562 CD7P09564 240 aa11.58□□□□□ -0.56
BRF1-212ENST00000547562 LINC00315P59091 139 aa11.58□□□□□ -0.56
BRF1-212ENST00000547562 BEX4Q9NWD9 120 aaPredicted RBP11.58□□□□□ -0.56
BRF1-212ENST00000547562 TEX15Q9BXT5 2789 aa11.58□□□□□ -0.56
BRF1-212ENST00000547562 SORL1Q92673 2214 aa11.58□□□□□ -0.56
BRF1-212ENST00000547562 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
BRF1-212ENST00000547562 GTSCR1Q86UQ5 136 aa11.58□□□□□ -0.56
BRF1-212ENST00000547562 COTL1Q14019 142 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 DEFB113Q30KQ7 82 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 RNF152Q8N8N0 203 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 Q5PR19 223 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 DUX5Q96PT3 197 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 SCGB3A1Q96QR1 104 aa11.57□□□□□ -0.56
BRF1-212ENST00000547562 A6NDN8 102 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 PLNP26678 52 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 TTTY13Q9BZ97 58 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 TRAV12-2A0A075B6T6 113 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 CSTL1Q9H114 145 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 JPT2Q9H910 190 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
BRF1-212ENST00000547562 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 C2orf66Q6UXQ4 117 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 LRRC75A-AS1Q8N1F1 130 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 F8VRH5 84 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 H7C1H1 209 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 CDKN1BP46527 198 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 OR4C5Q8NGB2 326 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
BRF1-212ENST00000547562 IGHV3-16A0A0C4DH30 117 aa11.54□□□□□ -0.56
BRF1-212ENST00000547562 AMMECR1LQ6DCA0 310 aa11.54□□□□□ -0.56
BRF1-212ENST00000547562 TRAV8-6A0A0B4J262 113 aa11.54□□□□□ -0.56
BRF1-212ENST00000547562 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
BRF1-212ENST00000547562 SUMO4Q6EEV6 95 aa11.54□□□□□ -0.56
BRF1-212ENST00000547562 NEXN-AS1Q8NBZ9 246 aa11.54□□□□□ -0.56
BRF1-212ENST00000547562 A0A087WWL8 130 aa11.53□□□□□ -0.56
BRF1-212ENST00000547562 H3BRM9 83 aa11.53□□□□□ -0.56
BRF1-212ENST00000547562 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms