RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 IGHG4P01861 327 aa13.09□□□□□ -0.31
LETMD1-210ENST00000547555 APELAP0DMC3 54 aa13.09□□□□□ -0.31
LETMD1-210ENST00000547555 KLRD1Q13241 179 aa13.09□□□□□ -0.31
LETMD1-210ENST00000547555 NRACQ8N912 160 aa13.09□□□□□ -0.31
LETMD1-210ENST00000547555 TMEM160Q9NX00 188 aa13.09□□□□□ -0.31
LETMD1-210ENST00000547555 MRPL35Q9NZE8 188 aaKnown RBP13.09□□□□□ -0.31
LETMD1-210ENST00000547555 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.31
LETMD1-210ENST00000547555 M0QXV9 152 aa13.08□□□□□ -0.31
LETMD1-210ENST00000547555 HOXA3O43365 443 aaPredicted RBP13.08□□□□□ -0.31
LETMD1-210ENST00000547555 PRTN3P24158 256 aa13.08□□□□□ -0.31
LETMD1-210ENST00000547555 EBI3Q14213 229 aa13.08□□□□□ -0.31
LETMD1-210ENST00000547555 WFDC2Q14508 124 aa13.08□□□□□ -0.31
LETMD1-210ENST00000547555 GTSF1LQ9H1H1 148 aa13.08□□□□□ -0.31
LETMD1-210ENST00000547555 MRPL16Q9NX20 251 aaKnown RBP13.08□□□□□ -0.31
LETMD1-210ENST00000547555 M0R381 172 aa13.08□□□□□ -0.32
LETMD1-210ENST00000547555 TIMM23O14925 209 aa13.08□□□□□ -0.32
LETMD1-210ENST00000547555 MED14OSP0DP75 135 aa13.08□□□□□ -0.32
LETMD1-210ENST00000547555 VMO1Q7Z5L0 202 aa13.08□□□□□ -0.32
LETMD1-210ENST00000547555 DLX4Q92988 240 aaPredicted RBP13.08□□□□□ -0.32
LETMD1-210ENST00000547555 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.32
LETMD1-210ENST00000547555 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
LETMD1-210ENST00000547555 FSHBP01225 129 aa13.07□□□□□ -0.32
LETMD1-210ENST00000547555 SMAGPQ0VAQ4 97 aa13.07□□□□□ -0.32
LETMD1-210ENST00000547555 C1QTNF4Q9BXJ3 329 aa13.07□□□□□ -0.32
LETMD1-210ENST00000547555 TRBV20-1A0A075B6N2 111 aa13.06□□□□□ -0.32
LETMD1-210ENST00000547555 CTSGP08311 255 aa13.06□□□□□ -0.32
LETMD1-210ENST00000547555 TCTAP57738 103 aa13.06□□□□□ -0.32
LETMD1-210ENST00000547555 RPL32P62910 135 aaKnown RBP13.06□□□□□ -0.32
LETMD1-210ENST00000547555 C9orf47Q6ZRZ4 202 aa13.06□□□□□ -0.32
LETMD1-210ENST00000547555 TOMM6Q96B49 74 aa13.06□□□□□ -0.32
LETMD1-210ENST00000547555 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
LETMD1-210ENST00000547555 ODF3BA8MYP8 253 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 DLX1P56177 255 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 FXYD7P58549 80 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 SMIM2Q9BVW6 85 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 SONP18583 2426 aaKnown RBP13.05□□□□□ -0.32
LETMD1-210ENST00000547555 HIVEP2P31629 2446 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 K7ERJ3 54 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 FOXI1Q12951 378 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 ETDBQ3ZM63 59 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 MINOS1Q5TGZ0 78 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 TEX29Q8N6K0 151 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 MINOS1-NBL1R4GNA1 71 aa13.05□□□□□ -0.32
LETMD1-210ENST00000547555 BUB3O43684 328 aa13.04□□□□□ -0.32
LETMD1-210ENST00000547555 CLEC3BP05452 202 aa13.04□□□□□ -0.32
LETMD1-210ENST00000547555 CKS1BP61024 79 aa13.04□□□□□ -0.32
LETMD1-210ENST00000547555 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
LETMD1-210ENST00000547555 Q8N6K4 173 aa13.04□□□□□ -0.32
LETMD1-210ENST00000547555 MSRB1Q9NZV6 116 aa13.04□□□□□ -0.32
LETMD1-210ENST00000547555 IGHV1-69DA0A0B4J2H0 117 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 APOMO95445 188 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 UBE2D1P51668 147 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 SCGB2A2Q13296 93 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 MAPKAPK5-AS1Q8N8E1 139 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 NEXN-AS1Q8NBZ9 246 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 ZNF418Q8TF45 676 aaPredicted RBP13.03□□□□□ -0.32
LETMD1-210ENST00000547555 AGRNO00468 2067 aa13.03□□□□□ -0.32
LETMD1-210ENST00000547555 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.32
LETMD1-210ENST00000547555 IGHV7-4-1A0A0J9YVY3 117 aa13.02□□□□□ -0.32
LETMD1-210ENST00000547555 TMEM262E9PQX1 116 aa13.02□□□□□ -0.32
LETMD1-210ENST00000547555 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.32
LETMD1-210ENST00000547555 COX7A1P24310 79 aa13.02□□□□□ -0.32
LETMD1-210ENST00000547555 UBE2E1P51965 193 aa13.02□□□□□ -0.32
LETMD1-210ENST00000547555 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.32
LETMD1-210ENST00000547555 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
LETMD1-210ENST00000547555 ERCC8Q13216 396 aa13.02□□□□□ -0.33
LETMD1-210ENST00000547555 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
LETMD1-210ENST00000547555 DYNAPQ8N1N2 210 aa13.02□□□□□ -0.33
LETMD1-210ENST00000547555 Q8TAT8 98 aa13.02□□□□□ -0.33
LETMD1-210ENST00000547555 FAM110DQ8TAY7 271 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-210ENST00000547555 SPANXA1Q9NS26 97 aa13.02□□□□□ -0.33
LETMD1-210ENST00000547555 NSD1Q96L73 2696 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-210ENST00000547555 IGHV1-69P01742 117 aa13.01□□□□□ -0.33
LETMD1-210ENST00000547555 UBE2D3P61077 147 aa13.01□□□□□ -0.33
LETMD1-210ENST00000547555 UBE2D2P62837 147 aa13.01□□□□□ -0.33
LETMD1-210ENST00000547555 SBSPONQ8IVN8 264 aa13.01□□□□□ -0.33
LETMD1-210ENST00000547555 PPDPFLQ8WWR9 84 aa13.01□□□□□ -0.33
LETMD1-210ENST00000547555 CRYBA4P53673 196 aa13□□□□□ -0.33
LETMD1-210ENST00000547555 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
LETMD1-210ENST00000547555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13□□□□□ -0.33
LETMD1-210ENST00000547555 ANK3Q12955 4377 aaKnown RBP13□□□□□ -0.33
LETMD1-210ENST00000547555 INAFM1C9JVW0 142 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 HERVK_113P61574 105 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 C9orf139Q6ZV77 190 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 POM121L12Q8N7R1 296 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 SCGB3A1Q96QR1 104 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 FN1P02751 2386 aaKnown RBP12.99□□□□□ -0.33
LETMD1-210ENST00000547555 NPFFO15130 113 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 SUMO2P61956 95 aaKnown RBP12.99□□□□□ -0.33
LETMD1-210ENST00000547555 SPANXN1Q5VSR9 72 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 C8orf86Q6ZUL3 223 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 TTTY13Q9BZ97 58 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 AGPAT4-IT1Q9H0P7 198 aa12.99□□□□□ -0.33
LETMD1-210ENST00000547555 IGHV3OR16-10A0A075B7F0 116 aa12.98□□□□□ -0.33
LETMD1-210ENST00000547555 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
LETMD1-210ENST00000547555 TEN1Q86WV5 123 aa12.98□□□□□ -0.33
LETMD1-210ENST00000547555 LINC01600Q96MT4 127 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms