RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 A0A0J9YY99 117 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 C9JAW5 83 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
NPAS3-205ENST00000547068 ADIPOQQ15848 244 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 RNF182Q8N6D2 247 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV3OR16-8A0A075B7F1 116 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 CRLF1O75462 422 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
NPAS3-205ENST00000547068 RNASE6Q93091 150 aaKnown RBP8.19□□□□□ -1.1
NPAS3-205ENST00000547068 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 SLC50A1Q9BRV3 221 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 KAAG1Q9UBP8 84 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 PRO1854Q9UHT4 67 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 IGLV11-55A0A075B6I3 123 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 FBXL19-AS1Q494R0 122 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 FAM208BQ5VWN6 2430 aa8.19□□□□□ -1.1
NPAS3-205ENST00000547068 RBAKDNA6NC62 111 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 TMEM95Q3KNT9 176 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 HIVEP3Q5T1R4 2406 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV4-4A0A075B6R2 117 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 TIMM23O14925 209 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 NBR2O15453 112 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 HERVK_113P61574 105 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
NPAS3-205ENST00000547068 IGHV3-35A0A0C4DH35 117 aa8.17□□□□□ -1.1
NPAS3-205ENST00000547068 M0QXV9 152 aa8.17□□□□□ -1.1
NPAS3-205ENST00000547068 CRIP2P52943 208 aaPredicted RBP8.17□□□□□ -1.1
NPAS3-205ENST00000547068 Q6ZS46 218 aa8.17□□□□□ -1.1
NPAS3-205ENST00000547068 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
NPAS3-205ENST00000547068 ITLN2Q8WWU7 325 aaPredicted RBP8.17□□□□□ -1.1
NPAS3-205ENST00000547068 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
NPAS3-205ENST00000547068 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
NPAS3-205ENST00000547068 Q6Q795 121 aa8.17□□□□□ -1.1
NPAS3-205ENST00000547068 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
NPAS3-205ENST00000547068 CTSGP08311 255 aa8.16□□□□□ -1.1
NPAS3-205ENST00000547068 FAM159AQ6UWV7 190 aa8.16□□□□□ -1.1
NPAS3-205ENST00000547068 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
NPAS3-205ENST00000547068 RPL39LQ96EH5 51 aaKnown RBP8.16□□□□□ -1.1
NPAS3-205ENST00000547068 PKDREJQ9NTG1 2253 aa8.16□□□□□ -1.1
NPAS3-205ENST00000547068 CENPVL3A0A0U1RRI6 287 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 C11orf86A6NJI1 115 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 EMP1P54849 157 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 Q6ZQT7 251 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 Q8N1Y9 231 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 TIMD4Q96H15 378 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 CRYGDP07320 174 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 CDSNQ15517 529 aa8.15□□□□□ -1.1
NPAS3-205ENST00000547068 LY6LH3BQJ8 138 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 PAPPA-AS1Q5QFB9 102 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 ZNF462Q96JM2 2506 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 IGLV4-69A0A075B6H9 119 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 TRAV8-4A0A0B4J246 113 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 M0R381 172 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 HES1Q14469 280 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 LINC01560Q8TB33 94 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 HIF1ANQ9NWT6 349 aa8.14□□□□□ -1.11
NPAS3-205ENST00000547068 H7C2G1 150 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 J3QKU1 62 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 DUSP14O95147 198 aaKnown RBP8.13□□□□□ -1.11
NPAS3-205ENST00000547068 ARL3P36405 182 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 BSPH1Q075Z2 132 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 ODF3Q96PU9 254 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 IGHV3-66A0A0C4DH42 116 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 TEX49A0A1B0GTD5 131 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 A4D1N5 150 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 BUB3O43684 328 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 MGPP08493 103 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 GRNP28799 593 aaKnown RBP8.13□□□□□ -1.11
NPAS3-205ENST00000547068 TSPEAR-AS2P59090 65 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 NPBQ8NG41 125 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 OR10J6PQ8NGY7 276 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 IGFBPL1Q8WX77 278 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 DYNLRB1Q9NP97 96 aa8.13□□□□□ -1.11
NPAS3-205ENST00000547068 SPRY2O43597 315 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 IGHV3-33P01772 117 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
NPAS3-205ENST00000547068 SPTBN1Q01082 2364 aaKnown RBP8.12□□□□□ -1.11
NPAS3-205ENST00000547068 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 PLA2G2AP14555 144 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 ATXN8Q156A1 80 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 COL12A1Q99715 3063 aa8.12□□□□□ -1.11
NPAS3-205ENST00000547068 IGHV3OR16-13A0A075B7E8 117 aa8.11□□□□□ -1.11
NPAS3-205ENST00000547068 IGHV3-74A0A0B4J1X5 117 aa8.11□□□□□ -1.11
NPAS3-205ENST00000547068 P0DMU3 169 aa8.11□□□□□ -1.11
NPAS3-205ENST00000547068 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
NPAS3-205ENST00000547068 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
NPAS3-205ENST00000547068 PMVKQ15126 192 aa8.11□□□□□ -1.11
NPAS3-205ENST00000547068 Q1RN00 199 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms