RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 HSPB8Q9UJY1 196 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 TRAV9-2A0A087WT02 112 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 FAM159AQ6UWV7 190 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 C9orf47Q6ZRZ4 202 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 RPL39LQ96EH5 51 aaKnown RBP9.58□□□□□ -0.88
SCAF11-209ENST00000547018 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 ID1P41134 155 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 ASIPP42127 132 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 NMUP48645 174 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 ZNF702PQ9H963 129 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 UQCR10Q9UDW1 63 aa9.58□□□□□ -0.88
SCAF11-209ENST00000547018 CTRLP40313 264 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 Q6YL49 198 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 C20orf144Q9BQM9 153 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 TTTY13Q9BZ97 58 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 OVOL1O14753 267 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 DEFB131AP59861 70 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 TMEM158Q8WZ71 300 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 ZNF747Q9BV97 191 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 VWFP04275 2813 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 APRG1Q8IVJ8 170 aa9.57□□□□□ -0.88
SCAF11-209ENST00000547018 F8P00451 2351 aa9.56□□□□□ -0.88
SCAF11-209ENST00000547018 PDZD2O15018 2839 aa9.56□□□□□ -0.88
SCAF11-209ENST00000547018 C7orf71A4D174 169 aa9.56□□□□□ -0.88
SCAF11-209ENST00000547018 A6NJY4 79 aa9.56□□□□□ -0.88
SCAF11-209ENST00000547018 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
SCAF11-209ENST00000547018 A0A1B0GW15 77 aa9.56□□□□□ -0.88
SCAF11-209ENST00000547018 J3QLI3 93 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 HBDP02042 147 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 A0A096LNJ9 63 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 OR2K2Q8NGT1 345 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 FOXC2Q99958 501 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 SMIM17P0DL12 118 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 TSPOP30536 169 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 CFHR3Q02985 330 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 MDFICQ9P1T7 246 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 LAMTOR2Q9Y2Q5 125 aa9.55□□□□□ -0.88
SCAF11-209ENST00000547018 NUDT3O95989 172 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 EMP1P54849 157 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 ZNF493Q6ZR52 646 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 TMEM160Q9NX00 188 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 SOCS3O14543 225 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 CRIP2P52943 208 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-209ENST00000547018 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 DCANP1Q8TF63 244 aa9.54□□□□□ -0.88
SCAF11-209ENST00000547018 H3BUA1 57 aa9.53□□□□□ -0.88
SCAF11-209ENST00000547018 J3QKU1 62 aa9.53□□□□□ -0.88
SCAF11-209ENST00000547018 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
SCAF11-209ENST00000547018 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-209ENST00000547018 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-209ENST00000547018 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
SCAF11-209ENST00000547018 TMEM238C9JI98 176 aa9.53□□□□□ -0.88
SCAF11-209ENST00000547018 TMEM61Q8N0U2 210 aa9.53□□□□□ -0.88
SCAF11-209ENST00000547018 SLC25A34Q6PIV7 304 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 NAA38Q9BRA0 125 aaKnown RBP9.51□□□□□ -0.89
SCAF11-209ENST00000547018 TENM1Q9UKZ4 2725 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 ZNF56Q15929 161 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 NSUN5P1Q3KNT7 163 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 OR1N2Q8NGR9 330 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 K7EMI3 77 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
SCAF11-209ENST00000547018 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 Q6ZSV7 163 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 GTSCR1Q86UQ5 136 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 RNASE3P12724 160 aaKnown RBP9.5□□□□□ -0.89
SCAF11-209ENST00000547018 KRTAP1-3Q8IUG1 177 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 Q8N1Y9 231 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 ELANEP08246 267 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 PCP2Q8IVA1 136 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
SCAF11-209ENST00000547018 MRPL53Q96EL3 112 aaKnown RBP9.49□□□□□ -0.89
SCAF11-209ENST00000547018 CD28P10747 220 aa9.49□□□□□ -0.89
SCAF11-209ENST00000547018 CDKN1BP46527 198 aa9.49□□□□□ -0.89
SCAF11-209ENST00000547018 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
SCAF11-209ENST00000547018 TRAV8-6A0A0B4J262 113 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 CD5LO43866 347 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 GAGE1Q13065 139 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 MYOZ3Q8TDC0 251 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 PPBPP02775 128 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 PLA2G2AP14555 144 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 CITED2Q99967 270 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-209ENST00000547018 MAST4O15021 2626 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 A0A0J9YX75 114 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 LINC01619G3V211 115 aa9.48□□□□□ -0.89
SCAF11-209ENST00000547018 FCER1GP30273 86 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms