RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GFI1BQ5VTD9 330 aa10.1□□□□□ -0.79
CLSTN3-216ENST00000545663 C10orf126Q8N4M7 172 aa10.1□□□□□ -0.79
CLSTN3-216ENST00000545663 HIST1H2BAQ96A08 127 aa10.1□□□□□ -0.79
CLSTN3-216ENST00000545663 GSN-AS1Q9NRJ2 163 aa10.1□□□□□ -0.79
CLSTN3-216ENST00000545663 TRGV1A0A0A0MS02 117 aa10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 M0R3E3 92 aa10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 CRYBA4P53673 196 aa10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 SUMO1P63165 101 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 ZNF680Q8NEM1 530 aa10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
CLSTN3-216ENST00000545663 FAM74A7A6NL05 159 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 EIF3GO75821 320 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 NMBP08949 121 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 CST9LP1Q5W188 147 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 PRO0255Q9UI72 69 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
CLSTN3-216ENST00000545663 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
CLSTN3-216ENST00000545663 J3KRW8 73 aa10.07□□□□□ -0.8
CLSTN3-216ENST00000545663 LEPP41159 167 aa10.07□□□□□ -0.8
CLSTN3-216ENST00000545663 RAB14P61106 215 aa10.07□□□□□ -0.8
CLSTN3-216ENST00000545663 CYB561D1Q8N8Q1 229 aa10.07□□□□□ -0.8
CLSTN3-216ENST00000545663 EPDR1Q9UM22 224 aa10.07□□□□□ -0.8
CLSTN3-216ENST00000545663 GGTLC3B5MD39 225 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 K7EQD1 137 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 TCRAP04437 139 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 S100A9P06702 114 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 ZNF138P52744 262 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 UBE2G2P60604 165 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 FHL2Q14192 279 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 C20orf144Q9BQM9 153 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 NDFIP1Q9BT67 221 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
CLSTN3-216ENST00000545663 TRAV12-3A0A0B4J271 114 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 PDE6DO43924 150 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 PAGE4O60829 102 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 IGLV2-11P01706 119 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 GYPEP15421 78 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 KLF12Q9Y4X4 402 aa10.05□□□□□ -0.8
CLSTN3-216ENST00000545663 A0A1B0GV50 99 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 PRAC2D3DTV9 90 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 SRIP30626 198 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 Q6ZRU5 148 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 TMEM75Q8N9X5 138 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 AGPAT4-IT1Q9H0P7 198 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 VAX2Q9UIW0 290 aa10.04□□□□□ -0.8
CLSTN3-216ENST00000545663 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 PEX7O00628 323 aa10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 BCL2P10415 239 aa10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 CRISP2P16562 243 aa10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 FMC1Q96HJ9 113 aa10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
CLSTN3-216ENST00000545663 RBFOX3A6NFN3 312 aa10.02□□□□□ -0.81
CLSTN3-216ENST00000545663 SPINK4O60575 86 aa10.02□□□□□ -0.81
CLSTN3-216ENST00000545663 UBE2G1P62253 170 aa10.02□□□□□ -0.81
CLSTN3-216ENST00000545663 MRPL16Q9NX20 251 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-216ENST00000545663 TRBV6-1A0A0K0K1D8 114 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 GPX1P07203 203 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 CT45A10P0DMU9 189 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 AKR1C3P42330 323 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 CCL20P78556 96 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 FLI1Q01543 452 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 BAALCQ8WXS3 180 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 VGLL1Q99990 258 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 SMDT1Q9H4I9 107 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 ZFP30Q9Y2G7 519 aa10.01□□□□□ -0.81
CLSTN3-216ENST00000545663 KLLNB2CW77 178 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 IGHV3-30P01768 117 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 IGHV3-33P01772 117 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 IGHV3-30-5P0DP03 117 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 GNG5P63218 68 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 ERCC8Q13216 396 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 SLAQ13239 276 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 C11orf52Q96A22 123 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 PYGO2Q9BRQ0 406 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 PSG8Q9UQ74 426 aa10□□□□□ -0.81
CLSTN3-216ENST00000545663 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
CLSTN3-216ENST00000545663 TMEM183BQ1AE95 376 aa9.99□□□□□ -0.81
CLSTN3-216ENST00000545663 TREM1Q9NP99 234 aa9.99□□□□□ -0.81
CLSTN3-216ENST00000545663 C7orf71A4D174 169 aa9.98□□□□□ -0.81
CLSTN3-216ENST00000545663 ZNF506Q5JVG8 444 aa9.98□□□□□ -0.81
CLSTN3-216ENST00000545663 SMIM12Q96EX1 92 aa9.98□□□□□ -0.81
CLSTN3-216ENST00000545663 FAM210AQ96ND0 272 aa9.98□□□□□ -0.81
CLSTN3-216ENST00000545663 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-216ENST00000545663 SFTA3P0C7M3 94 aa9.97□□□□□ -0.81
CLSTN3-216ENST00000545663 PEA15Q15121 130 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms