RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 ACANP16112 2415 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 AGRNO00468 2067 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
CHFR-224ENST00000545046 DEFB131AP59861 70 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 HILS1P60008 231 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 ATOH7Q8N100 152 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 MRAP2Q96G30 205 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 DPH3P1Q9H4G8 78 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 TSSC4Q9Y5U2 329 aaPredicted RBP12.37□□□□□ -0.43
CHFR-224ENST00000545046 TRAV12-2A0A075B6T6 113 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 SPRY2O43597 315 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 CD7P09564 240 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 SPINK13Q1W4C9 94 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 DEFB114Q30KQ6 69 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 ZNF747Q9BV97 191 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 CCL24O00175 119 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 ZNF705AQ6ZN79 300 aaPredicted RBP12.36□□□□□ -0.43
CHFR-224ENST00000545046 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 SMR3AQ99954 134 aa12.36□□□□□ -0.43
CHFR-224ENST00000545046 HBDP02042 147 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
CHFR-224ENST00000545046 A0A096LNJ9 63 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 TRAV26-2A0A0B4J265 109 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 OR4C46A6NHA9 309 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 KNCNA6PVL3 124 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 FHL3Q13643 280 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 AP1S3Q96PC3 154 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 JMJD8Q96S16 334 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
CHFR-224ENST00000545046 TRAV9-2A0A087WT02 112 aa12.34□□□□□ -0.43
CHFR-224ENST00000545046 LINC01546A6NGU7 62 aa12.34□□□□□ -0.43
CHFR-224ENST00000545046 AMTNQ6UX39 209 aa12.34□□□□□ -0.43
CHFR-224ENST00000545046 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
CHFR-224ENST00000545046 Q8N8P6 123 aa12.34□□□□□ -0.43
CHFR-224ENST00000545046 SORL1Q92673 2214 aa12.34□□□□□ -0.43
CHFR-224ENST00000545046 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 H0Y8G0 127 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 HLA-DRB4P13762 266 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 NRACQ8N912 160 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 HLA-DRB4X5D2U9 266 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 NXPH4O95158 308 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 LY6G6DO95868 133 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 FXYD7P58549 80 aa12.33□□□□□ -0.44
CHFR-224ENST00000545046 CD300EQ496F6 205 aaPredicted RBP12.33□□□□□ -0.44
CHFR-224ENST00000545046 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
CHFR-224ENST00000545046 MUC4Q99102 2169 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
CHFR-224ENST00000545046 TRAV25A0A0B4J276 109 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 H3BMM0 161 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 MGPP08493 103 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 DEFB125Q8N687 156 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 NF1P21359 2839 aa12.32□□□□□ -0.44
CHFR-224ENST00000545046 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
CHFR-224ENST00000545046 NDUFA7O95182 113 aa12.31□□□□□ -0.44
CHFR-224ENST00000545046 MAJINQ3KP22 176 aa12.31□□□□□ -0.44
CHFR-224ENST00000545046 A8MTW9 85 aa12.3□□□□□ -0.44
CHFR-224ENST00000545046 FCER1GP30273 86 aa12.3□□□□□ -0.44
CHFR-224ENST00000545046 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
CHFR-224ENST00000545046 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
CHFR-224ENST00000545046 Q8N1Y9 231 aa12.3□□□□□ -0.44
CHFR-224ENST00000545046 ANK3Q12955 4377 aaKnown RBP12.29□□□□□ -0.44
CHFR-224ENST00000545046 SYT8Q8NBV8 401 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 ZNF124Q15973 351 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 MCRIP2Q9BUT9 160 aaKnown RBP12.29□□□□□ -0.44
CHFR-224ENST00000545046 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 UQCR10Q9UDW1 63 aa12.29□□□□□ -0.44
CHFR-224ENST00000545046 HSBP1L1C9JCN9 74 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 PPP1R17O96001 155 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 IGLC3P0DOY3 106 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 LAGE3Q14657 143 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 RASL10AQ92737 203 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 ZNF256Q9Y2P7 627 aaPredicted RBP12.28□□□□□ -0.44
CHFR-224ENST00000545046 IGLL1P15814 213 aa12.28□□□□□ -0.44
CHFR-224ENST00000545046 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
CHFR-224ENST00000545046 TMEM158Q8WZ71 300 aa12.27□□□□□ -0.45
CHFR-224ENST00000545046 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
CHFR-224ENST00000545046 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.45
CHFR-224ENST00000545046 HECTD1Q9ULT8 2610 aa12.27□□□□□ -0.45
CHFR-224ENST00000545046 HIVEP2P31629 2446 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 CBY3A6NI87 242 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
CHFR-224ENST00000545046 RBMY1BA6NDE4 496 aaKnown RBP12.26□□□□□ -0.45
CHFR-224ENST00000545046 RBMY1EA6NEQ0 496 aaKnown RBP12.26□□□□□ -0.45
CHFR-224ENST00000545046 RBMY1DP0C7P1 496 aaKnown RBP12.26□□□□□ -0.45
CHFR-224ENST00000545046 PROK1P58294 105 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 LGALS9BQ3B8N2 356 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 LGALS9CQ6DKI2 356 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 JPT2Q9H910 190 aa12.26□□□□□ -0.45
CHFR-224ENST00000545046 hDV102S1A0JD36 115 aa12.25□□□□□ -0.45
CHFR-224ENST00000545046 LBHQ53QV2 105 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms