RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TTC32Q5I0X7 151 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 MUC4Q99102 2169 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 KRBOX1C9JBD0 128 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 K7EQD1 137 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 M0R036 132 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 GYPEP15421 78 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 CCL20P78556 96 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
CCDC78-216ENST00000544996 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 RS1O15537 224 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
CCDC78-216ENST00000544996 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 C9orf62Q8N4C0 152 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 NHLRC2Q8NBF2 726 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 IL36BQ9NZH7 164 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 NACAE9PAV3 2078 aa10.84□□□□□ -0.67
CCDC78-216ENST00000544996 A8MWV9 139 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 H3BVH4 76 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 IFNA1P01562 189 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 DNLZQ5SXM8 178 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 SH2D6Q7Z4S9 175 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 SYT8Q8NBV8 401 aa10.83□□□□□ -0.68
CCDC78-216ENST00000544996 DNAH10Q8IVF4 4471 aa10.82□□□□□ -0.68
CCDC78-216ENST00000544996 TMSB15BA0A087X1C1 80 aa10.82□□□□□ -0.68
CCDC78-216ENST00000544996 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
CCDC78-216ENST00000544996 SIVA1O15304 175 aa10.82□□□□□ -0.68
CCDC78-216ENST00000544996 NXPH4O95158 308 aa10.82□□□□□ -0.68
CCDC78-216ENST00000544996 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
CCDC78-216ENST00000544996 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 TRBV6-4A0A1B0GX49 114 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 GRIFINA4D1Z8 144 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 ATP6V1G1O75348 118 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 MGST1P10620 155 aaKnown RBP10.81□□□□□ -0.68
CCDC78-216ENST00000544996 RPL35P42766 123 aaKnown RBP10.81□□□□□ -0.68
CCDC78-216ENST00000544996 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 PHLDA3Q9Y5J5 127 aa10.81□□□□□ -0.68
CCDC78-216ENST00000544996 PDE6DO43924 150 aa10.8□□□□□ -0.68
CCDC78-216ENST00000544996 MEF2BQ02080 365 aaPredicted RBP10.8□□□□□ -0.68
CCDC78-216ENST00000544996 RHOHQ15669 191 aa10.8□□□□□ -0.68
CCDC78-216ENST00000544996 ZFP2Q6ZN57 461 aa10.8□□□□□ -0.68
CCDC78-216ENST00000544996 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
CCDC78-216ENST00000544996 FRAS1Q86XX4 4008 aa10.8□□□□□ -0.68
CCDC78-216ENST00000544996 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
CCDC78-216ENST00000544996 BTF3P20290 206 aaKnown RBP10.79□□□□□ -0.68
CCDC78-216ENST00000544996 TAGLN2P37802 199 aaKnown RBP10.79□□□□□ -0.68
CCDC78-216ENST00000544996 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
CCDC78-216ENST00000544996 PRR27Q6MZM9 219 aa10.79□□□□□ -0.68
CCDC78-216ENST00000544996 PARLQ9H300 379 aa10.79□□□□□ -0.68
CCDC78-216ENST00000544996 BCL2P10415 239 aa10.78□□□□□ -0.68
CCDC78-216ENST00000544996 DERL1Q9BUN8 251 aa10.78□□□□□ -0.68
CCDC78-216ENST00000544996 KRTAP1-5Q9BYS1 174 aa10.78□□□□□ -0.68
CCDC78-216ENST00000544996 SCRT2Q9NQ03 307 aa10.78□□□□□ -0.68
CCDC78-216ENST00000544996 VAX2Q9UIW0 290 aa10.78□□□□□ -0.68
CCDC78-216ENST00000544996 TRAV9-2A0A087WT02 112 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 A0A1B0GVY2 172 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 M0R381 172 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 RHODO00212 210 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 GNG4P50150 75 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 BLOC1S1P78537 153 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 CENPWQ5EE01 88 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 ALKAL2Q6UX46 152 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 ZFP82Q8N141 532 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
CCDC78-216ENST00000544996 DNAH2Q9P225 4427 aa10.76□□□□□ -0.69
CCDC78-216ENST00000544996 MED14OSP0DP75 135 aa10.76□□□□□ -0.69
CCDC78-216ENST00000544996 ZNF575Q86XF7 245 aa10.76□□□□□ -0.69
CCDC78-216ENST00000544996 SMIM12Q96EX1 92 aa10.76□□□□□ -0.69
CCDC78-216ENST00000544996 JPT2Q9H910 190 aa10.76□□□□□ -0.69
CCDC78-216ENST00000544996 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
CCDC78-216ENST00000544996 BIRC6Q9NR09 4857 aa10.75□□□□□ -0.69
CCDC78-216ENST00000544996 CXCL1P09341 107 aa10.75□□□□□ -0.69
CCDC78-216ENST00000544996 TIRAPP58753 221 aa10.75□□□□□ -0.69
CCDC78-216ENST00000544996 RPL19P84098 196 aaKnown RBP10.75□□□□□ -0.69
CCDC78-216ENST00000544996 FAM74A4Q5TZK3 123 aa10.75□□□□□ -0.69
CCDC78-216ENST00000544996 DAZAP1Q96EP5 407 aaKnown RBP10.75□□□□□ -0.69
CCDC78-216ENST00000544996 SFRP2Q96HF1 295 aa10.75□□□□□ -0.69
CCDC78-216ENST00000544996 SAMD10Q9BYL1 202 aa10.75□□□□□ -0.69
CCDC78-216ENST00000544996 K7EP13 123 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 EVI2AP22794 236 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 NKX2-5P52952 324 aaPredicted RBP10.74□□□□□ -0.69
CCDC78-216ENST00000544996 TNP2Q05952 138 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 UFSP1Q6NVU6 142 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 BIN3Q9NQY0 253 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 BOLA1Q9Y3E2 137 aa10.74□□□□□ -0.69
CCDC78-216ENST00000544996 A0A087WWL8 130 aa10.73□□□□□ -0.69
CCDC78-216ENST00000544996 TRAV8-6A0A0B4J262 113 aa10.73□□□□□ -0.69
CCDC78-216ENST00000544996 RAB19A4D1S5 217 aa10.73□□□□□ -0.69
CCDC78-216ENST00000544996 Q6ZSN1 163 aa10.73□□□□□ -0.69
CCDC78-216ENST00000544996 ATP6V0E2Q8NHE4 81 aa10.73□□□□□ -0.69
CCDC78-216ENST00000544996 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
CCDC78-216ENST00000544996 OR5AL1P0C617 328 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms