RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
USP28-212ENST00000544750 UBE2G2P60604 165 aa8.55□□□□□ -1.04
USP28-212ENST00000544750 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
USP28-212ENST00000544750 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
USP28-212ENST00000544750 STOML3Q8TAV4 291 aa8.55□□□□□ -1.04
USP28-212ENST00000544750 hCG_2014768A0A024R1R8 64 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 SFTA3P0C7M3 94 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 GYPEP15421 78 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 ZNF80P51504 273 aaPredicted RBP8.54□□□□□ -1.04
USP28-212ENST00000544750 ZNF415Q09FC8 603 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 CYB561D1Q8N8Q1 229 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 TMEM75Q8N9X5 138 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 ZNF479Q96JC4 524 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 TREM1Q9NP99 234 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 PSG8Q9UQ74 426 aa8.54□□□□□ -1.04
USP28-212ENST00000544750 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 UMAD1C9J7I0 102 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 PFDN1O60925 122 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 FLI1Q01543 452 aaPredicted RBP8.53□□□□□ -1.04
USP28-212ENST00000544750 TDRG1Q3Y452 100 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 FAM213BQ8TBF2 198 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 LINC00479Q96M42 142 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
USP28-212ENST00000544750 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 TRGV4A0A0C4DH28 118 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 A0A1B0GVG6 124 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 PEX7O00628 323 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 PSCAO43653 123 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 ORM1P02763 201 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 TPT1P13693 172 aaKnown RBP8.52□□□□□ -1.05
USP28-212ENST00000544750 TIRAPP58753 221 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 LINC01556Q5JQF7 62 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 RASL10AQ92737 203 aa8.52□□□□□ -1.05
USP28-212ENST00000544750 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 K7EQM0 130 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 OXTP01178 125 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 TYMSP04818 313 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 EIF5AP63241 154 aaKnown RBP8.51□□□□□ -1.05
USP28-212ENST00000544750 WFDC2Q14508 124 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 TMEM183BQ1AE95 376 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 DPPA3Q6W0C5 159 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 Q86TA4 180 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 AKAP14Q86UN6 197 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 TMEM183AQ8IXX5 376 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 SFT2D1Q8WV19 159 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 NKX6-2Q9C056 277 aaPredicted RBP8.51□□□□□ -1.05
USP28-212ENST00000544750 NAGKQ9UJ70 344 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 ARL2-SNX15V9GYD0 113 aa8.51□□□□□ -1.05
USP28-212ENST00000544750 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 A0A1B0GV50 99 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
USP28-212ENST00000544750 GNRH2O43555 120 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 IFNA7P01567 189 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 FAM159AQ6UWV7 190 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 C9orf62Q8N4C0 152 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
USP28-212ENST00000544750 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 NDFIP1Q9BT67 221 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
USP28-212ENST00000544750 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
USP28-212ENST00000544750 LOC100131303A0A0U1RQF7 123 aa8.49□□□□□ -1.05
USP28-212ENST00000544750 PAGE4O60829 102 aa8.49□□□□□ -1.05
USP28-212ENST00000544750 GCGP01275 180 aa8.49□□□□□ -1.05
USP28-212ENST00000544750 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
USP28-212ENST00000544750 SMUG1Q53HV7 270 aa8.49□□□□□ -1.05
USP28-212ENST00000544750 HIST1H2BAQ96A08 127 aa8.49□□□□□ -1.05
USP28-212ENST00000544750 C9JCJ5 164 aa8.48□□□□□ -1.05
USP28-212ENST00000544750 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
USP28-212ENST00000544750 SULT1A2P50226 295 aa8.48□□□□□ -1.05
USP28-212ENST00000544750 CST9LP1Q5W188 147 aa8.48□□□□□ -1.05
USP28-212ENST00000544750 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
USP28-212ENST00000544750 SLC51BQ86UW2 128 aa8.48□□□□□ -1.05
USP28-212ENST00000544750 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 TRBV6-1A0A0K0K1D8 114 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 CCL20P78556 96 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 SAPCD1Q5SSQ6 148 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 SCXQ7RTU7 201 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 ZC2HC1AQ96GY0 325 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 KCNS1Q96KK3 526 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 TCEAL7Q9BRU2 100 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 SPXQ9BT56 116 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 Q9HAA7 133 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 SDF2L1Q9HCN8 221 aa8.47□□□□□ -1.05
USP28-212ENST00000544750 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 CRIP1P50238 77 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 PPT1P50897 306 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 RAB5CP51148 216 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 ZFP69Q49AA0 526 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 FMC1Q96HJ9 113 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 C9orf85Q96MD7 179 aa8.46□□□□□ -1.06
USP28-212ENST00000544750 M0R2P5 195 aa8.45□□□□□ -1.06
USP28-212ENST00000544750 LTAP01374 205 aa8.45□□□□□ -1.06
USP28-212ENST00000544750 RNASE3P12724 160 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms