RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 TRAV26-2A0A0B4J265 109 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 A0A0D9SG52 128 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 CXorf51AA0A1B0GTR3 108 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 A8MT66 165 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 OR1I1O60431 355 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 CST8O60676 142 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 HYPMO75409 117 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 RPP14O95059 124 aaKnown RBP0.39□□□□□ -2.35
YBX3-214ENST00000544501 IFNA10P01566 189 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 SERPINE1P05121 402 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 RBP1P09455 135 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 OMPP47874 163 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 MAGOHP61326 146 aaKnown RBP0.39□□□□□ -2.35
YBX3-214ENST00000544501 AESQ08117 197 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 PDE6HQ13956 83 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 HIST3H3Q16695 136 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 ACOT6Q3I5F7 207 aaPredicted RBP0.39□□□□□ -2.35
YBX3-214ENST00000544501 BRMS1LQ5PSV4 323 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 SCIMPQ6UWF3 145 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 TEX261Q6UWH6 196 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 ZCCHC23Q6ZST2 131 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 TRAPPC6BQ86SZ2 158 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 PHF13Q86YI8 300 aaPredicted RBP0.39□□□□□ -2.35
YBX3-214ENST00000544501 LINC00301Q8NCQ3 95 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 OR52L1Q8NGH7 329 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 OR13C4Q8NGS5 318 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 SLC25A40Q8TBP6 338 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 ARL5BQ96KC2 179 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 TSPAN32Q96QS1 320 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 OR52E6Q96RD3 313 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 NIPSNAP1Q9BPW8 284 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 TMEM70Q9BUB7 260 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 C6orf62Q9GZU0 229 aaPredicted RBP0.39□□□□□ -2.35
YBX3-214ENST00000544501 MIXL1Q9H2W2 232 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 CDC42SE1Q9NRR8 79 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 VPS29Q9UBQ0 182 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 EPDR1Q9UM22 224 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 ZFP30Q9Y2G7 519 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 PRELID3BQ9Y3B1 194 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 U3KQ87 197 aa0.39□□□□□ -2.35
YBX3-214ENST00000544501 TCRBV4S1A1TA0A5B7 111 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 hADV38S2A0JD32 116 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 CYB5BO43169 146 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 OR2T1O43869 369 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 OR2J2O76002 312 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 PROSCO94903 275 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 UBL3O95164 117 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 TCL1BO95988 128 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 ZNF25P17030 456 aaPredicted RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 CASP1P29466 404 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 CEBPGP53567 150 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 RHOGP84095 191 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 IMPG1Q17R60 797 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 KRTAP19-2Q3LHN2 52 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 SPRNQ5BIV9 151 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 S100A7AQ86SG5 101 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 LYG2Q86SG7 212 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 OR6V1Q8N148 313 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 OR51A2Q8NGJ7 313 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 OR8D4Q8NGM9 314 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 SFT2D1Q8WV19 159 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 DGCR14Q96DF8 476 aaKnown RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 RNASE7Q9H1E1 156 aaKnown RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 UQCC1Q9NVA1 299 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 TAS2R4Q9NYW5 299 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 MRPL27Q9P0M9 148 aaKnown RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 FBXO5Q9UKT4 447 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 BOKQ9UMX3 212 aaPredicted RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 SLC35A3Q9Y2D2 325 aa0.38□□□□□ -2.35
YBX3-214ENST00000544501 HEATR1Q9H583 2144 aaKnown RBP0.38□□□□□ -2.35
YBX3-214ENST00000544501 TANC2Q9HCD6 1990 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 SNRNP200O75643 2136 aaKnown RBP0.37□□□□□ -2.35
YBX3-214ENST00000544501 A0A087WUJ7 227 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 A0A087X0T9 212 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 UQCRHLA0A096LP55 91 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 SMIM9A6NGZ8 99 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 TMEM114B3SHH9 223 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 ATP6V1G2-DDX39BF2Z307 99 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 M0R2T5 61 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 PDE6DO43924 150 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 LYZL6O75951 148 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 GADD45GO95257 159 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 TTRP02766 147 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 TCRBP04435 133 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 IFNA4P05014 189 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 CD2P06729 351 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 OR4E1P0C645 316 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 MIFP14174 115 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 CDKN2CP42773 168 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 MT4P47944 62 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 INSL3P51460 131 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 LSM6P62312 80 aaKnown RBP0.37□□□□□ -2.35
YBX3-214ENST00000544501 RANP62826 216 aaKnown RBP0.37□□□□□ -2.35
YBX3-214ENST00000544501 LINC01554Q52M75 96 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 SOSTDC1Q6X4U4 206 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 LINC00322Q6ZN03 302 aaPredicted RBP0.37□□□□□ -2.35
YBX3-214ENST00000544501 UBE2DNLQ8IWF7 75 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 Q8N814 137 aa0.37□□□□□ -2.35
YBX3-214ENST00000544501 GDPD1Q8N9F7 314 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms