RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.82
CHD4-211ENST00000544484 RPL39LQ96EH5 51 aaKnown RBP9.95□□□□□ -0.82
CHD4-211ENST00000544484 OVOL2Q9BRP0 275 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 CCDC168Q8NDH2 2452 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 FGF6P10767 208 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 MRPL36Q9P0J6 103 aaKnown RBP9.95□□□□□ -0.82
CHD4-211ENST00000544484 K7ERJ3 54 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 BUB3O43684 328 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 A0A087WW49 117 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
CHD4-211ENST00000544484 PRAC2D3DTV9 90 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 IGLV2-14P01704 120 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 RHOHQ15669 191 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 ODF3L1Q8IXM7 274 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 CGB3P0DN86 165 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 ESM1Q9NQ30 184 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 IGKV1OR2-108A0A075B7D4 117 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 RBAKDNA6NC62 111 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 KLF5Q13887 457 aaPredicted RBP9.94□□□□□ -0.82
CHD4-211ENST00000544484 DENND4AQ7Z401 1863 aa9.94□□□□□ -0.82
CHD4-211ENST00000544484 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 SORL1Q92673 2214 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 NCOR2Q9Y618 2525 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 MRPL52Q86TS9 123 aaKnown RBP9.93□□□□□ -0.82
CHD4-211ENST00000544484 LURAP1LQ8IV03 231 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 ZNF747Q9BV97 191 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 HERVK_113P63121 156 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 PIFOQ8TCI5 191 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 Q9HAA7 133 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 LENEPQ9Y5L5 61 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 KLF2Q9Y5W3 355 aaPredicted RBP9.93□□□□□ -0.82
CHD4-211ENST00000544484 ETDBQ3ZM63 59 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 ZNF493Q6ZR52 646 aa9.93□□□□□ -0.82
CHD4-211ENST00000544484 C9orf118A6NHY6 69 aa9.92□□□□□ -0.82
CHD4-211ENST00000544484 SCRT2Q9NQ03 307 aa9.92□□□□□ -0.82
CHD4-211ENST00000544484 C16orf54Q6UWD8 224 aa9.92□□□□□ -0.82
CHD4-211ENST00000544484 FAM167A-AS1Q96KT0 104 aa9.92□□□□□ -0.82
CHD4-211ENST00000544484 IGKV2D-24A0A075B6R9 120 aa9.92□□□□□ -0.82
CHD4-211ENST00000544484 CDPF1Q6NVV7 123 aa9.92□□□□□ -0.82
CHD4-211ENST00000544484 TMEM126AQ9H061 195 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 PIEZO2Q9H5I5 2752 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 SRSF2Q01130 221 aaKnown RBP9.91□□□□□ -0.82
CHD4-211ENST00000544484 DAZAP2Q15038 168 aaPredicted RBP9.91□□□□□ -0.82
CHD4-211ENST00000544484 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 PRO1854Q9UHT4 67 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 H3BMM0 161 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 PCP2Q8IVA1 136 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 CEND1Q8N111 149 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 UBE2WQ96B02 151 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 ZMAT4Q9H898 229 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 EDA2RQ9HAV5 297 aa9.91□□□□□ -0.82
CHD4-211ENST00000544484 PCNX3Q9H6A9 2034 aa9.9□□□□□ -0.82
CHD4-211ENST00000544484 NUPR1O60356 82 aa9.9□□□□□ -0.82
CHD4-211ENST00000544484 CGB7P0DN87 165 aa9.9□□□□□ -0.82
CHD4-211ENST00000544484 AMTNQ6UX39 209 aa9.9□□□□□ -0.82
CHD4-211ENST00000544484 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
CHD4-211ENST00000544484 ABCA2Q9BZC7 2435 aa9.9□□□□□ -0.82
CHD4-211ENST00000544484 PIEZO1Q92508 2521 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 IGLV10-54A0A075B6I4 117 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 SOCS3O14543 225 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 UTF1Q5T230 341 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 C22orf34Q6ZV56 151 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 IGF2RP11717 2491 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 TRBV12-3P01733 135 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 PLA2G5P39877 138 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 C2orf70A6NJV1 201 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 Q9H8V8 135 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 EP400Q96L91 3159 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 H3BMG7 143 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 NPSP0C0P6 89 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
CHD4-211ENST00000544484 GYPEP15421 78 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 SIRPDQ9H106 197 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 WI2-2373I1.2A0A1W2PRP0 233 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 Q8N1Y9 231 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 CRYGCP07315 174 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 UNQ9165/PRO28630Q6UXU0 137 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 MED12LQ86YW9 2145 aa9.88□□□□□ -0.83
CHD4-211ENST00000544484 Q6ZVH6 145 aa9.87□□□□□ -0.83
CHD4-211ENST00000544484 WDR87Q6ZQQ6 2873 aa9.87□□□□□ -0.83
CHD4-211ENST00000544484 CRLF1O75462 422 aa9.87□□□□□ -0.83
CHD4-211ENST00000544484 C19orf84I3L1E1 186 aa9.87□□□□□ -0.83
CHD4-211ENST00000544484 DEFB4AO15263 64 aa9.87□□□□□ -0.83
CHD4-211ENST00000544484 FBXL19-AS1Q494R0 122 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 NAV2Q8IVL1 2488 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 HAMPP81172 84 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 BOD1L2Q8IYS8 172 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 RMI2Q96E14 147 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 LTBP2Q14767 1821 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 IGHG2P01859 326 aa9.86□□□□□ -0.83
CHD4-211ENST00000544484 FRMD6-AS1P0C7T7 363 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms