RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 PRR9Q5T870 116 aa10.75□□□□□ -0.69
VPS33A-209ENST00000544349 SAMD13Q5VXD3 122 aa10.75□□□□□ -0.69
VPS33A-209ENST00000544349 ADAMTSL5Q6ZMM2 481 aa10.75□□□□□ -0.69
VPS33A-209ENST00000544349 MS4A6AQ9H2W1 248 aa10.75□□□□□ -0.69
VPS33A-209ENST00000544349 ID1P41134 155 aa10.74□□□□□ -0.69
VPS33A-209ENST00000544349 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
VPS33A-209ENST00000544349 DEFB1P60022 68 aa10.73□□□□□ -0.69
VPS33A-209ENST00000544349 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
VPS33A-209ENST00000544349 DLX4Q92988 240 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-209ENST00000544349 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
VPS33A-209ENST00000544349 MTORP42345 2549 aa10.73□□□□□ -0.69
VPS33A-209ENST00000544349 GATA1P15976 413 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-209ENST00000544349 LINC00477Q96M19 166 aa10.73□□□□□ -0.69
VPS33A-209ENST00000544349 CITED2Q99967 270 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-209ENST00000544349 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-209ENST00000544349 EVI2AP22794 236 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 GAGE1Q13065 139 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 ZNF124Q15973 351 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 OR10J6PQ8NGY7 276 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 RAX2Q96IS3 184 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 LENEPQ9Y5L5 61 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 A0A1W2PRX2 142 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 HSBP1L1C9JCN9 74 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 K7EQG2 157 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 TCF21O43680 179 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 HBDP02042 147 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 SLC25A34Q6PIV7 304 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 GOLT1BQ9Y3E0 138 aa10.72□□□□□ -0.69
VPS33A-209ENST00000544349 PROK1P58294 105 aa10.71□□□□□ -0.69
VPS33A-209ENST00000544349 FHL3Q13643 280 aa10.71□□□□□ -0.69
VPS33A-209ENST00000544349 MPV17L2Q567V2 206 aa10.71□□□□□ -0.69
VPS33A-209ENST00000544349 F6UB75 175 aa10.7□□□□□ -0.7
VPS33A-209ENST00000544349 CACNG7P62955 275 aa10.7□□□□□ -0.7
VPS33A-209ENST00000544349 HIST1H1AQ02539 215 aaPredicted RBP10.7□□□□□ -0.7
VPS33A-209ENST00000544349 ANKRD39Q53RE8 183 aa10.7□□□□□ -0.7
VPS33A-209ENST00000544349 J3KRW8 73 aa10.7□□□□□ -0.7
VPS33A-209ENST00000544349 CCL24O00175 119 aa10.7□□□□□ -0.7
VPS33A-209ENST00000544349 TCTAP57738 103 aa10.7□□□□□ -0.7
VPS33A-209ENST00000544349 CRLF1O75462 422 aa10.69□□□□□ -0.7
VPS33A-209ENST00000544349 TNFRSF6BO95407 300 aa10.69□□□□□ -0.7
VPS33A-209ENST00000544349 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
VPS33A-209ENST00000544349 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
VPS33A-209ENST00000544349 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
VPS33A-209ENST00000544349 TRAV26-2A0A0B4J265 109 aa10.68□□□□□ -0.7
VPS33A-209ENST00000544349 SNAI2O43623 268 aa10.68□□□□□ -0.7
VPS33A-209ENST00000544349 PSMG4Q5JS54 123 aa10.68□□□□□ -0.7
VPS33A-209ENST00000544349 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
VPS33A-209ENST00000544349 MAP1LC3AQ9H492 121 aa10.68□□□□□ -0.7
VPS33A-209ENST00000544349 H3BVH4 76 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 SPRY2O43597 315 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 LGALS9BQ3B8N2 356 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 BVES-AS1Q5T3Y7 98 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 LGALS9CQ6DKI2 356 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 ZFAND2AQ8N6M9 145 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 NUDT3O95989 172 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 COX8AP10176 69 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 FGF6P10767 208 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
VPS33A-209ENST00000544349 NF1P21359 2839 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 LINC01546A6NGU7 62 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 PPBPP02775 128 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 ERASQ7Z444 233 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 LEPP41159 167 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 APRG1Q8IVJ8 170 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
VPS33A-209ENST00000544349 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.7
VPS33A-209ENST00000544349 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
VPS33A-209ENST00000544349 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
VPS33A-209ENST00000544349 NRACQ8N912 160 aa10.65□□□□□ -0.7
VPS33A-209ENST00000544349 DKK2Q9UBU2 259 aa10.65□□□□□ -0.7
VPS33A-209ENST00000544349 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.71
VPS33A-209ENST00000544349 A0A0J9YX75 114 aa10.64□□□□□ -0.71
VPS33A-209ENST00000544349 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
VPS33A-209ENST00000544349 ORAOV1Q8WV07 137 aa10.64□□□□□ -0.71
VPS33A-209ENST00000544349 HIVEP1P15822 2718 aa10.64□□□□□ -0.71
VPS33A-209ENST00000544349 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 TRAV21A0A0B4J279 112 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 TAX1BP3O14907 124 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 CCL25O15444 150 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 FCER1GP30273 86 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 NSUN5P1Q3KNT7 163 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 CD300EQ496F6 205 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-209ENST00000544349 SPANXN1Q5VSR9 72 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 TMEM158Q8WZ71 300 aa10.63□□□□□ -0.71
VPS33A-209ENST00000544349 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
VPS33A-209ENST00000544349 IGHV4-4A0A075B6R2 117 aa10.62□□□□□ -0.71
VPS33A-209ENST00000544349 KLLNB2CW77 178 aa10.62□□□□□ -0.71
VPS33A-209ENST00000544349 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
VPS33A-209ENST00000544349 FOXI2Q6ZQN5 318 aa10.62□□□□□ -0.71
VPS33A-209ENST00000544349 Q8N8P6 123 aa10.62□□□□□ -0.71
VPS33A-209ENST00000544349 ODF3Q96PU9 254 aa10.62□□□□□ -0.71
VPS33A-209ENST00000544349 MUC4Q99102 2169 aa10.62□□□□□ -0.71
VPS33A-209ENST00000544349 TRAV25A0A0B4J276 109 aa10.61□□□□□ -0.71
VPS33A-209ENST00000544349 DUSP14O95147 198 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms