RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NUDT10Q8NFP7 164 aa4.48□□□□□ -1.69
LTBR-212ENST00000543542 NUDT11Q96G61 164 aa4.48□□□□□ -1.69
LTBR-212ENST00000543542 NDUFAF3Q9BU61 184 aa4.48□□□□□ -1.69
LTBR-212ENST00000543542 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
LTBR-212ENST00000543542 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
LTBR-212ENST00000543542 IL36BQ9NZH7 164 aa4.48□□□□□ -1.69
LTBR-212ENST00000543542 LY96Q9Y6Y9 160 aa4.48□□□□□ -1.69
LTBR-212ENST00000543542 DNAH7Q8WXX0 4024 aa4.48□□□□□ -1.69
LTBR-212ENST00000543542 IGHV4-4A0A075B6R2 117 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 TRAV4A0A0B4J268 109 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 MUC21A0A0G2JKD1 596 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 A0A0J9YY99 117 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 MUC21A0A140T8X8 626 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 C19orf71A6NCJ1 209 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 C9JQL5 133 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 NUDT3O95989 172 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 CXCL1P09341 107 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 GZMBP10144 247 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 RNASE3P12724 160 aaKnown RBP4.47□□□□□ -1.69
LTBR-212ENST00000543542 TMEM88Q6PEY1 159 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 ZFP82Q8N141 532 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 LINC00612Q8N6U2 182 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 RASL10AQ92737 203 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 BORCS7Q96B45 105 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 C9orf85Q96MD7 179 aa4.47□□□□□ -1.69
LTBR-212ENST00000543542 TRAV26-1A0A087WT03 109 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 IGHV3-73A0A0B4J1V6 119 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 A8MWL6 223 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 A8MWV9 139 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 F8W036 122 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 SMIM17P0DL12 118 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 MED14OSP0DP75 135 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 TCTAP57738 103 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 RPL23P62829 140 aaKnown RBP4.46□□□□□ -1.7
LTBR-212ENST00000543542 SLAQ13239 276 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 DNLZQ5SXM8 178 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 FAM74A4Q5TZK3 123 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 UQCC3Q6UW78 93 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 FAM231DQ6ZW35 169 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 OR10G8Q8NGN5 311 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 ZNF479Q96JC4 524 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 FAM210BQ96KR6 192 aa4.46□□□□□ -1.7
LTBR-212ENST00000543542 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 F2Z2F3 143 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 RS1O15537 224 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 PAX4O43316 350 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 CIDEAO60543 219 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 LY6G6CO95867 125 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 OR5AL1P0C617 328 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 HOXA5P20719 270 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 CACNG7P62955 275 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 CFAP126Q5VTH2 177 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 DMRTA1Q5VZB9 504 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 LYZL1Q6UWQ5 148 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 UBE2DNLQ8IWF7 75 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 C15orf53Q8NAA6 179 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 OR10AG1Q8NH19 301 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 PTH2Q96A98 100 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 ISOC2Q96AB3 205 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 SFRP2Q96HF1 295 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 C18orf15Q96N68 181 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 OSTCQ9NRP0 149 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 PRO0255Q9UI72 69 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 HHLA3Q9XRX5 114 aa4.45□□□□□ -1.7
LTBR-212ENST00000543542 A0A087WWL8 130 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 TMEM218A2RU14 115 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 F5H697 171 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 RHODO00212 210 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 SNAI2O43623 268 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 MGPP08493 103 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 PNRC1Q12796 327 aaPredicted RBP4.44□□□□□ -1.7
LTBR-212ENST00000543542 FHL2Q14192 279 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 TWIST1Q15672 202 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 ZNF56Q15929 161 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 PIK3CD-AS1Q5SR53 167 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 SMIM15Q7Z3B0 74 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 PGLYRP4Q96LB8 373 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 AP1S3Q96PC3 154 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 PRADC1Q9BSG0 188 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 JPT2Q9H910 190 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 SCRT2Q9NQ03 307 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 APLNQ9ULZ1 77 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 ICOSQ9Y6W8 199 aa4.44□□□□□ -1.7
LTBR-212ENST00000543542 MUC4Q99102 2169 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 STAB2Q8WWQ8 2551 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 STARD9Q9P2P6 4700 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 A0A096LPF7 62 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 PPP1R2P9O14990 202 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 MT-ND4LP03901 98 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 IGLC6P0CF74 106 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 P0DMU3 169 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 FAM231AP0DMU4 169 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 FAM231CP0DMU5 169 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 GYPEP15421 78 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 NTF3P20783 257 aa4.43□□□□□ -1.7
LTBR-212ENST00000543542 SRIP30626 198 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms