RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TMEM189	A5PLL7	270 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	GAGE10	A6NGK3	116 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	LEPROTL1	O95214	131 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	MFAP2	P55001	183 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	TCL1A	P56279	114 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	HSPE1	P61604	102 aa	Known RBP	4.78	□□□□□ -1.64
CIT-213	ENST00000543324	C15orf32	Q32M92	178 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	TMEM97	Q5BJF2	176 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	PSMG4	Q5JS54	123 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	OR4A5	Q8NH83	315 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	VSTM2A	Q8TAG5	236 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	MAP1LC3C	Q9BXW4	147 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	PLEKHA3	Q9HB20	300 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	CRCT1	Q9UGL9	99 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	hDV102S1	A0JD36	115 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	TMEM213	A2RRL7	107 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	ZNF785	A8K8V0	405 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	C16orf90	A8MZG2	172 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	INS-IGF2	F8WCM5	200 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	SPINK4	O60575	86 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	MGST1	P10620	155 aa	Known RBP	4.77	□□□□□ -1.65
CIT-213	ENST00000543324	MYOD1	P15172	320 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	EDN2	P20800	178 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	GATA2	P23769	480 aa	Predicted RBP	4.77	□□□□□ -1.65
CIT-213	ENST00000543324	RPL27A	P46776	148 aa	Known RBP	4.77	□□□□□ -1.65
CIT-213	ENST00000543324	RPL8	P62917	257 aa	Known RBP	4.77	□□□□□ -1.65
CIT-213	ENST00000543324	HBB	P68871	147 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	HSD52	Q0P140	79 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	C2orf83	Q53S99	150 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	SPINK9	Q5DT21	86 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	BPIFA4P	Q86YQ2	179 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	GPHB5	Q86YW7	130 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	C5orf17	Q8NAS9	161 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	FAM167A-AS1	Q96KT0	104 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	AP1S3	Q96PC3	154 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	SRSF8	Q9BRL6	282 aa	Known RBP	4.77	□□□□□ -1.65
CIT-213	ENST00000543324	ZNF355P	Q9NSJ1	428 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	TMEM14B	Q9NUH8	114 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	TMEM140	Q9NV12	185 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	CLEC5A	Q9NY25	188 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	KLF12	Q9Y4X4	402 aa		4.77	□□□□□ -1.65
CIT-213	ENST00000543324	TRAV3	A0A0B4J244	114 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	TRBV6-1	A0A0K0K1D8	114 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324		A8MWL6	223 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324		F8W735	103 aa	Predicted RBP	4.76	□□□□□ -1.65
CIT-213	ENST00000543324	UPK2	O00526	184 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	PEX7	O00628	323 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	FGF6	P10767	208 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	PRCD	Q00LT1	54 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	ATP5G2	Q06055	141 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	DEFB114	Q30KQ6	69 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	LGALS9B	Q3B8N2	356 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	CD300E	Q496F6	205 aa	Predicted RBP	4.76	□□□□□ -1.65
CIT-213	ENST00000543324	SAMD13	Q5VXD3	122 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.76	□□□□□ -1.65
CIT-213	ENST00000543324	C16orf54	Q6UWD8	224 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	BOD1L2	Q8IYS8	172 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	OR1L4	Q8NGR5	311 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	OR1L8	Q8NGR8	309 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	ZNF502	Q8TBZ5	544 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	ATP6V0B	Q99437	205 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	MLST8	Q9BVC4	326 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.76	□□□□□ -1.65
CIT-213	ENST00000543324	ENY2	Q9NPA8	101 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324	PEMT	Q9UBM1	199 aa		4.76	□□□□□ -1.65
CIT-213	ENST00000543324		A0A087X0K7	114 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.75	□□□□□ -1.65
CIT-213	ENST00000543324	TRBV7-1	A0A0A6YYK4	115 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324		A0A1B0GV72	72 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324		A0A1B0GW15	77 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	C19orf71	A6NCJ1	209 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	HIGD1C	A8MV81	97 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	NPIPB6	E9PJ23	425 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	ACTL6B	O94805	426 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	CD7	P09564	240 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	WT1-AS	Q06250	92 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	UNQ9165/PRO28630	Q6UXU0	137 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	CACNG8	Q8WXS5	425 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	SLC25A2	Q9BXI2	301 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	WFDC10A	Q9H1F0	79 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	RPP21	Q9H633	154 aa	Known RBP	4.75	□□□□□ -1.65
CIT-213	ENST00000543324	NDUFA4L2	Q9NRX3	87 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324	PRND	Q9UKY0	176 aa		4.75	□□□□□ -1.65
CIT-213	ENST00000543324		A0A1W2PPM0	123 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	CA1	P00915	261 aa	Predicted RBP	4.74	□□□□□ -1.65
CIT-213	ENST00000543324	CT45A10	P0DMU9	189 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	ARL3	P36405	182 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	CSN1S1	P47710	185 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	FOXA3	P55318	350 aa	Predicted RBP	4.74	□□□□□ -1.65
CIT-213	ENST00000543324	UBE2L3	P68036	154 aa	Known RBP	4.74	□□□□□ -1.65
CIT-213	ENST00000543324	CLEC19A	Q6UXS0	136 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	FOXI2	Q6ZQN5	318 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.74	□□□□□ -1.65
CIT-213	ENST00000543324	LINC00173	Q6ZV60	143 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	FA2H	Q7L5A8	372 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	ERAS	Q7Z444	233 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	GTSCR1	Q86UQ5	136 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	TMEM61	Q8N0U2	210 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	THAP8	Q8NA92	274 aa		4.74	□□□□□ -1.65
CIT-213	ENST00000543324	STXBP6	Q8NFX7	210 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms