RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 PLNP26678 52 aa13.96□□□□□ -0.17
COPS7A-215ENST00000543155 C10orf99Q6UWK7 81 aa13.96□□□□□ -0.17
COPS7A-215ENST00000543155 TRAV8-6A0A0B4J262 113 aa13.96□□□□□ -0.18
COPS7A-215ENST00000543155 RNF223E7ERA6 249 aa13.96□□□□□ -0.18
COPS7A-215ENST00000543155 TGFAP01135 160 aa13.96□□□□□ -0.18
COPS7A-215ENST00000543155 ODF3Q96PU9 254 aa13.95□□□□□ -0.18
COPS7A-215ENST00000543155 COL12A1Q99715 3063 aa13.95□□□□□ -0.18
COPS7A-215ENST00000543155 SCGB3A1Q96QR1 104 aa13.94□□□□□ -0.18
COPS7A-215ENST00000543155 C9orf118A6NHY6 69 aa13.94□□□□□ -0.18
COPS7A-215ENST00000543155 COX6B1P14854 86 aa13.94□□□□□ -0.18
COPS7A-215ENST00000543155 VPREB3Q9UKI3 123 aa13.94□□□□□ -0.18
COPS7A-215ENST00000543155 H7C1H1 209 aa13.93□□□□□ -0.18
COPS7A-215ENST00000543155 KIF25-AS1Q9Y6Z4 181 aa13.93□□□□□ -0.18
COPS7A-215ENST00000543155 FLNCQ14315 2725 aa13.93□□□□□ -0.18
COPS7A-215ENST00000543155 F8VRH5 84 aa13.93□□□□□ -0.18
COPS7A-215ENST00000543155 LGALS1P09382 135 aaKnown RBP13.93□□□□□ -0.18
COPS7A-215ENST00000543155 SNRPD3P62318 126 aaKnown RBP13.93□□□□□ -0.18
COPS7A-215ENST00000543155 CHAC1Q9BUX1 264 aa13.93□□□□□ -0.18
COPS7A-215ENST00000543155 TTTY13Q9BZ97 58 aa13.93□□□□□ -0.18
COPS7A-215ENST00000543155 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-215ENST00000543155 TRAV12-3A0A0B4J271 114 aa13.92□□□□□ -0.18
COPS7A-215ENST00000543155 ZNF688P0C7X2 276 aa13.92□□□□□ -0.18
COPS7A-215ENST00000543155 K7EQG2 157 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 CD7P09564 240 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 LINC00315P59091 139 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 MAPK1IP1LQ8NDC0 245 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 TRBV25-1A0A075B6N4 114 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 A0A0J9YX75 114 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 FSHBP01225 129 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 ELANEP08246 267 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 RPL32P62910 135 aaKnown RBP13.91□□□□□ -0.18
COPS7A-215ENST00000543155 C2orf66Q6UXQ4 117 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 NEXN-AS1Q8NBZ9 246 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 WFDC12Q8WWY7 111 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 CSTL1Q9H114 145 aa13.91□□□□□ -0.18
COPS7A-215ENST00000543155 CHTOPQ9Y3Y2 248 aaKnown RBP13.91□□□□□ -0.18
COPS7A-215ENST00000543155 MUC4Q99102 2169 aa13.9□□□□□ -0.18
COPS7A-215ENST00000543155 IGHV4OR15-8A0A075B7B6 117 aa13.9□□□□□ -0.18
COPS7A-215ENST00000543155 A0A087WW49 117 aa13.9□□□□□ -0.18
COPS7A-215ENST00000543155 LGALS9O00182 355 aa13.9□□□□□ -0.18
COPS7A-215ENST00000543155 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
COPS7A-215ENST00000543155 Q6YL49 198 aa13.9□□□□□ -0.18
COPS7A-215ENST00000543155 SPG11Q96JI7 2443 aa13.89□□□□□ -0.19
COPS7A-215ENST00000543155 CELSR2Q9HCU4 2923 aa13.89□□□□□ -0.19
COPS7A-215ENST00000543155 SYNJ2BPP57105 145 aa13.89□□□□□ -0.19
COPS7A-215ENST00000543155 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
COPS7A-215ENST00000543155 CBY1Q9Y3M2 126 aa13.89□□□□□ -0.19
COPS7A-215ENST00000543155 GCSHP23434 173 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 JMJD8Q96S16 334 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 H3BUT2 72 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 PRB1P04280 392 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 IGHV4-31P0DP07 118 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 SUMO4Q6EEV6 95 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 BAALCQ8WXS3 180 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
COPS7A-215ENST00000543155 IGHV3-16A0A0C4DH30 117 aa13.87□□□□□ -0.19
COPS7A-215ENST00000543155 GAGE10A6NGK3 116 aa13.87□□□□□ -0.19
COPS7A-215ENST00000543155 GTF2H5Q6ZYL4 71 aa13.87□□□□□ -0.19
COPS7A-215ENST00000543155 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
COPS7A-215ENST00000543155 JPT2Q9H910 190 aa13.87□□□□□ -0.19
COPS7A-215ENST00000543155 DUSP14O95147 198 aaKnown RBP13.86□□□□□ -0.19
COPS7A-215ENST00000543155 IGKV3-20P01619 116 aa13.86□□□□□ -0.19
COPS7A-215ENST00000543155 SMIM13P0DJ93 91 aa13.86□□□□□ -0.19
COPS7A-215ENST00000543155 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-215ENST00000543155 FXYD2P54710 66 aa13.86□□□□□ -0.19
COPS7A-215ENST00000543155 MAPKAPK5-AS1Q8N8E1 139 aa13.86□□□□□ -0.19
COPS7A-215ENST00000543155 RAB37Q96AX2 223 aa13.86□□□□□ -0.19
COPS7A-215ENST00000543155 LINC01549A6NIU2 74 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 CDKN1BP46527 198 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 SYT8Q8NBV8 401 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 CYSLTR1Q9Y271 337 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 TRAV12-2A0A075B6T6 113 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 A0A087WWL8 130 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 POLR2KP53803 58 aaKnown RBP13.85□□□□□ -0.19
COPS7A-215ENST00000543155 UFSP1Q6NVU6 142 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 NEGR1Q7Z3B1 354 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 CEND1Q8N111 149 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 TM2D2Q9BX73 214 aa13.85□□□□□ -0.19
COPS7A-215ENST00000543155 F5H697 171 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 K7EP34 96 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 HOXA3O43365 443 aaPredicted RBP13.84□□□□□ -0.19
COPS7A-215ENST00000543155 TAL2Q16559 108 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 UTP20O75691 2785 aaKnown RBP13.84□□□□□ -0.19
COPS7A-215ENST00000543155 IGHV1OR15-1A0A075B7D0 117 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 OR11H12B2RN74 326 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 VCYO14598 125 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 FOXI2Q6ZQN5 318 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 OR11H1Q8NG94 326 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 OR11H2Q8NH07 326 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 CST9LQ9H4G1 147 aa13.84□□□□□ -0.19
COPS7A-215ENST00000543155 CR1P17927 2039 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 PRSS29PA6NIE9 313 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 SPINK13Q1W4C9 94 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 ZFP2Q6ZN57 461 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 DUX5Q96PT3 197 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 NAA38Q9BRA0 125 aaKnown RBP13.83□□□□□ -0.2
COPS7A-215ENST00000543155 MDFICQ9P1T7 246 aa13.83□□□□□ -0.2
COPS7A-215ENST00000543155 ANKRD17O75179 2603 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms