RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
SRGAP1-205ENST00000542841 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 SNAI2O43623 268 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 INSP01308 110 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 OR5AL1P0C617 328 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 RAB5BP61020 215 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 HBBP68871 147 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 SPINK13Q1W4C9 94 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 C1QTNF4Q9BXJ3 329 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
SRGAP1-205ENST00000542841 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 LOC102724200A0A096LPH7 203 aaPredicted RBP8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 J3KRW8 73 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 M0R2Z0 102 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 CRXO43186 299 aaPredicted RBP8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 IGKV3-20P01619 116 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 GZMBP10144 247 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 ASIPP42127 132 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 CACNG7P62955 275 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 ZNF124Q15973 351 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 ANXA2RQ3ZCQ2 193 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 TMEM256Q8N2U0 113 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 PGLYRP4Q96LB8 373 aa8.39□□□□□ -1.07
SRGAP1-205ENST00000542841 TRGV11A0A075B6L2 103 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 IGHV1OR15-1A0A075B7D0 117 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 TMSB15BA0A087X1C1 80 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 MRPL54Q6P161 138 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 LYZL1Q6UWQ5 148 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 ZNF575Q86XF7 245 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
SRGAP1-205ENST00000542841 TRAV12-2A0A075B6T6 113 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 TRGC2P03986 189 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 S100A4P26447 101 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 NAGKQ9UJ70 344 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
SRGAP1-205ENST00000542841 GRIFINA4D1Z8 144 aa8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 PHOX2AO14813 284 aa8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 SPRY2O43597 315 aa8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 SPINK4O60575 86 aa8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 Q6ZWC4 215 aa8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 PHLDA1Q8WV24 401 aaPredicted RBP8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
SRGAP1-205ENST00000542841 APOC4P55056 127 aa8.35□□□□□ -1.07
SRGAP1-205ENST00000542841 RAB4BP61018 213 aa8.35□□□□□ -1.07
SRGAP1-205ENST00000542841 MUC21Q5SSG8 566 aa8.35□□□□□ -1.07
SRGAP1-205ENST00000542841 Q6ZQT7 251 aa8.35□□□□□ -1.07
SRGAP1-205ENST00000542841 TPPP3Q9BW30 176 aa8.35□□□□□ -1.07
SRGAP1-205ENST00000542841 IGHV3-16A0A0C4DH30 117 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 KIR2DL5BA0A0G2JN68 375 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 KIR2DL5BA0A0G2JPC4 375 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 H3BVH4 76 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 NXPH4O95158 308 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 TRGC1P0CF51 173 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 RNASE3P12724 160 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 CAMPP49913 170 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 FXYD7P58549 80 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 FABP9Q0Z7S8 132 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 DEFB135Q30KP9 77 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 KIR2DL5AQ8N109 375 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 ZFP82Q8N141 532 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 KIR2DL5BQ8NHK3 375 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 FRZBQ92765 325 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 PTH2Q96A98 100 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 C9orf85Q96MD7 179 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 TMEM191AQ9H0A3 160 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 TMA7Q9Y2S6 64 aaKnown RBP8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 GOLT1BQ9Y3E0 138 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
SRGAP1-205ENST00000542841 CBY3A6NI87 242 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 UBE2CO00762 179 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 GNRH2O43555 120 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 APCSP02743 223 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 NTF3P20783 257 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 TWIST1Q15672 202 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 SPANXN1Q5VSR9 72 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 DMRTA1Q5VZB9 504 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 LINC01587Q99440 93 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 NDUFAF3Q9BU61 184 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms